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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00058231-protein ID=TCONS_00058231-protein|Name=TCONS_00058231-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1160bp
MADSDEQRRTLLYQKMGELESTDDIDERRELRRQIRELRNKKFDEEMKKI
SSGEISASSVSNGLSTGRAKSTRTTTANTEEEGADPYGLLAYNDEDTLQE
LLNDTPFTETDKRRKIRARMRDIRNGVNVNVSAPKPKPEPVRQPSPEPAR
EPSPEPVREPSPEPVREPSPEPVREPSPEPVREPSPEPVREPSPEPVREP
TPEPVREPSPEPEPVREPSPEPVREPTPEPESEEEEEEEERPASPVRDSP
EVSDHEDEPEEDEPEEEEEEEEIIEDEEEDEVSEREDDDEQEEEIYSDEP
LSDEEEEESRHEEEATSSRGRQTFSTGSGSTGRSSGVGSSGGYVDDIMAV
PEPGIEGGKGFKDKLKKSSKPPTNLERHVKGGEQVDFRNSLKKKGGAPAV
NLERKLQGPGQVDFRTNLQRKVETSKKDFAGGEQVDFRTSLKKKVPKPIF
DKGVGAPVQVDFRTNLQRKVQTKVGTDKGMTAEQKDFRTLLGSKATPTKV
EPKRDEEKPNFKKHLKKAEDSPRSSRKKKEPEPEPEAEEVVPSEEPEDEP
EVVDNQPEAEPEVEAKQEEVKEEAPIVEEKPKSSRRRRVVAAEEEKEAPK
AEAKPKTARSSRRAAAAEEESPKGETKSRRRRVVEEKKKEPEQEEVDAKP
ESPKPAAKKQPPAPAPKKKAAVPAPAPKKKEPEPEPEVEEEEEELKVKVS
VSNVSKAASDDDGEEVEGKARNRNTPKVAPKAVAPKPASKTRRVVKDAEP
APAPKEEVKKEEAPKEEAKTTPRRSRLAAKKAEEVGSTEEKPSSATRRSR
LRKDDSQDSKSSTTTTTTTTRTSRLAKKEETQTTSRVSKTAPAPAKKVVQ
SKMMGRIKFGSDDEADAAPAPAKEETTVTVEETVETVKFEQKDDDGNDVR
IGKRTSRLSKKTKDEGPIEVSADLLAEINKPKEEPVRKPIVIRKPADNKP
KRELTGKAAEREAQRQKEREERERAREERAAARAKEREAAQKKRAEERKA
FEKKQQERKMQLAMKERSKLKGTRDARHAFKDQLEENTKDDPKGESNVKI
NSNVTKLLAWTQHQLMGYKGVDIENFSESWADGLAFAALMHSFFPEDVPI
EELSKDTQRRNFEIAFQIATEEGVMDLLDIEDMVRMKSPDPKSIITYLND
VYRVFVIECE Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 951..1023 |
| None | No IPR available | COILS | Coil | Coil | coord: 21..48 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 466..1026 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 101..399 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 51..88 |
| IPR001715 | Calponin homology domain | SMART | SM00033 | ch_5 | coord: 1053..1151
e-value: 2.7E-11
score: 53.5 |
| IPR001715 | Calponin homology domain | GENE3D | 1.10.418.10 | | coord: 1031..1159
e-value: 5.6E-24
score: 83.9 |
| IPR001715 | Calponin homology domain | PFAM | PF00307 | CH | coord: 1055..1155
e-value: 5.5E-17
score: 61.8 |
| IPR001715 | Calponin homology domain | PROSITE | PS50021 | CH | coord: 1051..1153
score: 14.496 |
| IPR001715 | Calponin homology domain | CDD | cd00014 | CH | coord: 1057..1155
e-value: 9.97297E-19
score: 82.7439 |
| IPR001715 | Calponin homology domain | SUPERFAMILY | 47576 | Calponin-homology domain, CH-domain | coord: 1046..1149 |
| IPR022189 | Smoothelin | PFAM | PF12510 | Smoothelin | coord: 89..124
e-value: 4.1E-5
score: 23.4 |
Blast
BLAST of TCONS_00058231-protein vs. Swiss-Prot (Human)
Match: CYTSA (Cytospin-A OS=Homo sapiens GN=SPECC1L PE=1 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 5.583e-28 Identity = 45/99 (45.45%), Postives = 66/99 (66.67%), Query Frame = 0
Query: 1057 LLAWTQHQLMGYKGVDIENFSESWADGLAFAALMHSFFPEDVPIEELSKDTQRRNFEIAFQIATEEGVMDLLDIEDMVRMKSPDPKSIITYLNDVYRVF 1155
LL W Q + GY+ +DI NFS SW DGLAF AL+H++ P +P +EL+ +RRNF +AFQ A G+ LDI +MVR + PD ++++ Y+ +Y+ F
Sbjct: 1017 LLKWCQKKTEGYQNIDITNFSSSWNDGLAFCALLHTYLPAHIPYQELNSQDKRRNFMLAFQAAESVGIKSTLDINEMVRTERPDWQNVMLYVTAIYKYF 1115
The following BLAST results are available for this feature:
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