TCONS_00058261-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058261-protein
Unique NameTCONS_00058261-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length423

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058261-protein ID=TCONS_00058261-protein|Name=TCONS_00058261-protein|organism=Clytia hemisphaerica|type=polypeptide|length=423bp
MGLTECRQKGIGILLHYETVKIIDIKNKKVGALYRFIQLIIISYVIGYVI
VYKKGYQEFDVAISTVTTKLKGTTYVDFGKFNSTLFNGIRIYDPSDYVIP
PQETDAVFVMTNMILTPKQSQSNCPEDSKFKDIHCKKDSDCPKMVPVKNG
NGVRTGKCVSSDRNSSMTVCEIYGWCPTEVDQLPMPNNNFSDTVPLLDGT
KYSTMLVKNQISFPKFRAIRNNIIQFNDSTYLKRCHYNSDTDPLCPIFNL
EDIVSSCGDNYTDVAYQGAIYGIIIEWDCNLDHSIDECLPKYQFKRLDDV
NSPISPGYNFRYADYYVEEDTRYRVLTKAYGIKFELLVHGKAGKFNVIPL
LTNLGAGMALLGIATVWCDFIVMYLLKKRNVYREHKYQRVDDDSQDPKGN
VQVDDDENELESDRPEAERLIKP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036701XLOC_036701Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058261TCONS_00058261Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001429P2X_purnocptor
IPR027309P2X_extracellular_dom
Vocabulary: Biological Process
TermDefinition
GO:0033198response to ATP
GO:0098655cation transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0001614purinergic nucleotide receptor activity
GO:0004931extracellular ATP-gated cation channel activity
Vocabulary: Cellular Component
TermDefinition
GO:0005887integral component of plasma membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0098655 cation transmembrane transport
biological_process GO:0033198 response to ATP
cellular_component GO:0005887 integral component of plasma membrane
molecular_function GO:0004931 extracellular ATP-gated cation channel activity
molecular_function GO:0001614 purinergic nucleotide receptor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001429P2X purinoreceptorPRINTSPR01307P2XRECEPTORcoord: 325..339
score: 52.46
coord: 306..316
score: 71.54
coord: 168..179
score: 57.97
coord: 90..98
score: 50.72
IPR001429P2X purinoreceptorTIGRFAMTIGR00863TIGR00863coord: 10..387
e-value: 3.2E-132
score: 438.9
IPR001429P2X purinoreceptorPFAMPF00864P2X_receptorcoord: 15..395
e-value: 2.8E-138
score: 460.9
IPR001429P2X purinoreceptorPIRSFPIRSF005713P2X_purinoceptorcoord: 3..418
e-value: 2.9E-145
score: 482.0
NoneNo IPR availableGENE3D1.10.287.940coord: 333..377
e-value: 1.5E-20
score: 72.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 389..423
IPR027309P2X purinoreceptor extracellular domainGENE3D2.60.490.10coord: 58..332
e-value: 1.8E-99
score: 332.2

Blast
[Close]
BLAST of TCONS_00058261-protein vs. Swiss-Prot (Human)
Match: P2RX4 (P2X purinoceptor 4 OS=Homo sapiens GN=P2RX4 PE=1 SV=2)

HSP 1 Score: 358.607 bits (919), Expect = 1.295e-121
Identity = 183/397 (46.10%), Postives = 252/397 (63.48%), Query Frame = 0 
Query:    3 LTECRQKGIGILLHYETVKIIDIKNKKVGALYRFIQLIIISYVIGYVIVYKKGYQEFDVAISTVTTKLKGTTYVDFGKFNSTLFNGIRIYDPSDYVIPPQETDAVFVMTNMILTPKQSQSNCPEDSKFKDIHCKKDSDCPKMVPVKNGNGVRTGKCVSSDRNSSMTVCEIYGWCPTEVD-QLPMPNNNFSDTVPLLDGTKYSTMLVKNQISFPKFRAIRNNIIQFNDSTYLKRCHYNSDTDPLCPIFNLEDIVSSCGDNYTDVAYQGAIYGIIIEWDCNLDHSIDECLPKYQFKRLD--DVNSPISPGYNFRYADYYVE-EDTRYRVLTKAYGIKFELLVHGKAGKFNVIPLLTNLGAGMALLGIATVWCDFIVMYLLKKRNVYREHKYQRVDDDSQ 395
            +  C       L  Y+T +I+ I+++KVG + R +QL+I++YVIG+V V++KGYQE D  +S+VTTK+KG    +  K       G RI+D +DYVIP QE +++FVMTN+ILT  Q+Q  CPE      + CK D+ C       + NGV TG+CV+   N S+  CE+  WCP E D  +P P          L   +  T+LVKN I +PKF   + NI+    +TYLK C Y++ TDP CPIF L  IV + G ++ D+A +G I GI + WDCNLD +   CLP+Y F+RLD  DV   +SPGYNFR+A YY +      R L KAYGI+F+++V GKAGKF++IP + N+G+G+ALLG+ATV CD IV+Y +KKR  YRE KY+ V+D  Q
Sbjct:    1 MAGCCAALAAFLFEYDTPRIVLIRSRKVGLMNRAVQLLILAYVIGWVFVWEKGYQETDSVVSSVTTKVKGVAVTNTSKL------GFRIWDVADYVIPAQEENSLFVMTNVILTMNQTQGLCPEIPDATTV-CKSDASCTAGSAGTHSNGVSTGRCVAF--NGSVKTCEVAAWCPVEDDTHVPQP--------AFLKAAENFTLLVKNNIWYPKFNFSKRNILPNITTTYLKSCIYDAKTDPFCPIFRLGKIVENAGHSFQDMAVEGGIMGIQVNWDCNLDRAASLCLPRYSFRRLDTRDVEHNVSPGYNFRFAKYYRDLAGNEQRTLIKAYGIRFDIIVFGKAGKFDIIPTMINIGSGLALLGMATVLCDIIVLYCMKKRLYYREKKYKYVEDYEQ 380
The following BLAST results are available for this feature:
BLAST of TCONS_00058261-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
P2RX41.295e-12146.10P2X purinoceptor 4 OS=Homo sapiens GN=P2RX4 PE=1 S... [more]
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