TCONS_00058280-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058280-protein
Unique NameTCONS_00058280-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length162

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058280-protein ID=TCONS_00058280-protein|Name=TCONS_00058280-protein|organism=Clytia hemisphaerica|type=polypeptide|length=162bp
TYLEKLNQNKRDFRDFVISKIIESTLGHIRYHFLDSNGPKYGAVTEEHSI
AVRYFCYPFKDANLTADEELAESPSNANLIMAHNGWVAGGDILKGFVGED
SHVFLCRELFAWGDSIKLRYGDSPDDVPFLWEYMKQYTEQMARMFHGVRL
DNCHNTPLHVAE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036712XLOC_036712Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058280TCONS_00058280Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032792AGL_glucanoTrfase
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032792Glycogen debranching enzyme, glucanotransferase domainPFAMPF14701hDGE_amylasecoord: 2..162
e-value: 1.7E-55
score: 188.8
NoneNo IPR availableGENE3D3.20.20.80coord: 7..162
e-value: 3.7E-10
score: 39.0

Blast
[Close]
BLAST of TCONS_00058280-protein vs. Swiss-Prot (Human)
Match: GDE (Glycogen debranching enzyme OS=Homo sapiens GN=AGL PE=1 SV=3)

HSP 1 Score: 170.629 bits (431), Expect = 1.230e-49
Identity = 76/160 (47.50%), Postives = 105/160 (65.62%), Query Frame = 0 
Query:    3 LEKLNQNKRDFRDFVISKIIESTLGHIRYHFLDSNGPKYGAVTEEHSIAVRYFCYPFKDANLTADEELAESPSNANLIMAHNGWVAGGDILKGFVGEDSHVFLCRELFAWGDSIKLRYGDSPDDVPFLWEYMKQYTEQMARMFHGVRLDNCHNTPLHVAE 162
            +E+LN  K    ++   + +   LG++ Y  L  +GPK G VT +H +  RYF +PF++ + + +E +   P+ A  +MAHNGWV G D L+ F    S V+L REL  WGDS+KLRYG+ P+D P+LW +MK+YTE  A  F GVRLDNCH+TPLHVAE
Sbjct:  378 MEELNSEKHRLINYHQEQAVNCLLGNVFYERLAGHGPKLGPVTRKHPLVTRYFTFPFEEIDFSMEESMIHLPNKACFLMAHNGWVMGDDPLRNFAEPGSEVYLRRELICWGDSVKLRYGNKPEDCPYLWAHMKKYTEITATYFQGVRLDNCHSTPLHVAE 537
The following BLAST results are available for this feature:
BLAST of TCONS_00058280-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GDE1.230e-4947.50Glycogen debranching enzyme OS=Homo sapiens GN=AGL... [more]
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