TCONS_00058308-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058308-protein
Unique NameTCONS_00058308-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length436

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058308-protein ID=TCONS_00058308-protein|Name=TCONS_00058308-protein|organism=Clytia hemisphaerica|type=polypeptide|length=436bp
MTGCAKVKNFGYDFLFNYQTVKLAEIKDKKVGLSFRVIQLAIVCYIIFYV
IIYKKGYQEFDTAISTISTKMKGITHVDFTGFNSSLFNGLQVYDAEDYVI
KPKDGNSLFVMTNMVITPKQYQGKCPEDPESYQALCKTDKDCQQETSNKY
GHGERTGRCVPSYRNSTLTVCEIHGWCPTEDDRLPMIKSNVSTNIPLLEG
TKHATVLIKNQIDFMKFDVATYNIPNTNNRTYMKKCRYNAKTDPLCPIFR
LQDIVSSCGDNYTQVAFKGAIYGIIIEWKCNLDYSIEECLPKYRFKRLDN
SRSSISKGFNFRYVNYYVEKGKRYRTLTKAFGIKFELLAHGKAGKFNIIP
LLTNLGAGIGLLGLATLCCDFIVLNLVPKRNVYRDYICADVTQEYEEHLR
EAAKEEKEEATRLKLMMVNKCAVRSPHTARKLLEML
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036725XLOC_036725Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058308TCONS_00058308Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001429P2X_purnocptor
IPR027309P2X_extracellular_dom
Vocabulary: Biological Process
TermDefinition
GO:0033198response to ATP
GO:0098655cation transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0001614purinergic nucleotide receptor activity
GO:0004931extracellular ATP-gated cation channel activity
Vocabulary: Cellular Component
TermDefinition
GO:0005887integral component of plasma membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0098655 cation transmembrane transport
biological_process GO:0033198 response to ATP
cellular_component GO:0005887 integral component of plasma membrane
molecular_function GO:0004931 extracellular ATP-gated cation channel activity
molecular_function GO:0001614 purinergic nucleotide receptor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 388..416
NoneNo IPR availableGENE3D1.10.287.940coord: 334..378
e-value: 2.1E-18
score: 65.5
IPR001429P2X purinoreceptorPRINTSPR01307P2XRECEPTORcoord: 307..317
score: 52.57
coord: 169..180
score: 57.97
coord: 91..99
score: 47.34
coord: 326..340
score: 48.7
IPR001429P2X purinoreceptorPIRSFPIRSF005713P2X_purinoceptorcoord: 2..417
e-value: 8.3E-136
score: 450.3
IPR001429P2X purinoreceptorPFAMPF00864P2X_receptorcoord: 16..394
e-value: 1.6E-130
score: 435.3
IPR001429P2X purinoreceptorTIGRFAMTIGR00863TIGR00863coord: 13..385
e-value: 5.9E-126
score: 418.2
IPR027309P2X purinoreceptor extracellular domainGENE3D2.60.490.10coord: 59..333
e-value: 7.0E-98
score: 326.9

Blast
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BLAST of TCONS_00058308-protein vs. Swiss-Prot (Human)
Match: P2RX4 (P2X purinoceptor 4 OS=Homo sapiens GN=P2RX4 PE=1 SV=2)

HSP 1 Score: 324.709 bits (831), Expect = 2.840e-108
Identity = 163/391 (41.69%), Postives = 243/391 (62.15%), Query Frame = 0 
Query:    1 MTGCAKVKNFGYDFLFNYQTVKLAEIKDKKVGLSFRVIQLAIVCYIIFYVIIYKKGYQEFDTAISTISTKMKGITHVDFTGFNSSLFNGLQVYDAEDYVIKPKDGNSLFVMTNMVITPKQYQGKCPEDPESYQALCKTDKDCQQETSNKYGHGERTGRCVPSYRNSTLTVCEIHGWCPTEDDRLPMIKSNVSTNIP---LLEGTKHATVLIKNQIDFMKFDVATYNIPNTNNRTYMKKCRYNAKTDPLCPIFRLQDIVSSCGDNYTQVAFKGAIYGIIIEWKCNLDYSIEECLPKYRFKRLD--NSRSSISKGFNFRYVNYYVE-KGKRYRTLTKAFGIKFELLAHGKAGKFNIIPLLTNLGAGIGLLGLATLCCDFIVLNLVPKRNVYRD 385
            M GC         FLF Y T ++  I+ +KVGL  R +QL I+ Y+I +V +++KGYQE D+ +S+++TK+KG+   + +        G +++D  DYVI  ++ NSLFVMTN+++T  Q QG CPE P++   +CK+D  C   ++  + +G  TGRCV    N ++  CE+  WCP EDD          T++P    L+  ++ T+L+KN I + KF+ +  NI      TY+K C Y+AKTDP CPIFRL  IV + G ++  +A +G I GI + W CNLD +   CLP+Y F+RLD  +   ++S G+NFR+  YY +  G   RTL KA+GI+F+++  GKAGKF+IIP + N+G+G+ LLG+AT+ CD IVL  + KR  YR+
Sbjct:    1 MAGCCAALA---AFLFEYDTPRIVLIRSRKVGLMNRAVQLLILAYVIGWVFVWEKGYQETDSVVSSVTTKVKGVAVTNTSKL------GFRIWDVADYVIPAQEENSLFVMTNVILTMNQTQGLCPEIPDA-TTVCKSDASCTAGSAGTHSNGVSTGRCVAF--NGSVKTCEVAAWCPVEDD----------THVPQPAFLKAAENFTLLVKNNIWYPKFNFSKRNILPNITTTYLKSCIYDAKTDPFCPIFRLGKIVENAGHSFQDMAVEGGIMGIQVNWDCNLDRAASLCLPRYSFRRLDTRDVEHNVSPGYNFRFAKYYRDLAGNEQRTLIKAYGIRFDIIVFGKAGKFDIIPTMINIGSGLALLGMATVLCDIIVLYCMKKRLYYRE 369
The following BLAST results are available for this feature:
BLAST of TCONS_00058308-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
P2RX42.840e-10841.69P2X purinoceptor 4 OS=Homo sapiens GN=P2RX4 PE=1 S... [more]
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