TCONS_00058318-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058318-protein
Unique NameTCONS_00058318-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length345

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058318-protein ID=TCONS_00058318-protein|Name=TCONS_00058318-protein|organism=Clytia hemisphaerica|type=polypeptide|length=345bp
MSASVRELDNIDEWIKEWDNFDEKLTSIKDNEYTKLMTLMQDYHRAQTSL
KKQVDMQVKNMKAFAISLQRIGNQDKTGKNKEKLLELRKRMTNKSRVFDE
FHQGLPKTAGWFLKACIGEINVSLFWDKQHYKEVYEKFKLKMMIIAMMIG
IINLIIMPQARFFDAIFHGILVWYYSSLTLQEQILRANGSRIKGWYVTHH
YLSILVSGFLLIWPKSVTYNLFRSQFYYFVIYLSFVQMLQYYYQQGMLYK
LRALGHGKQMDLTGDGLRSSAMKGLGFLLPFLVVGYAFQVYNAITLYYLS
YHPECHEWQVLASAVLFFFIACGNVWTLMIVLRQKMGGEVRLPCG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036731XLOC_036731Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058318TCONS_00058318Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012926TMPIT
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012926TMPIT-likePFAMPF07851TMPITcoord: 16..336
e-value: 1.8E-100
score: 336.3

Blast
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BLAST of TCONS_00058318-protein vs. Swiss-Prot (Human)
Match: T120B (Transmembrane protein 120B OS=Homo sapiens GN=TMEM120B PE=1 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 3.131e-74
Identity = 128/333 (38.44%), Postives = 193/333 (57.96%), Query Frame = 0 
Query:   16 KEWDNFDEKLTSIKDNEYTKLMTLMQDYHRAQTSLKKQVDMQVKNMKAFAISLQRIGNQDKTGKNKEKLLELRKRMTNKSRVFDEFHQGLPKTAGWFLKACIGEINVSLFWDKQH--YKEVYEKFKLKMMIIAMMIGIINLIIMPQARFFDAIFHGILVWYYSSLTLQEQILRANGSRIKGWYVTHHYLSILVSGFLLIWPKSVTYNLFRSQFYYFVIYLSFVQMLQYYYQQGMLYKLRALGHGKQMDLTGDGLRSSAMKGLGFLLPFLVVGYAFQVYNAITLYYLSYHPECHEWQVLASAVLFFFIACGNVWTLMIVLR---QKMGGEVRLP 343
            +EW   + +   +++        L ++    QT     +  Q K++K   ++LQR   +  + +  E + ++   +  +  VF +    LPK  G +L   +G +NV+L  ++    YK+ YEKFKL + II +++G +    +   R  D +F+ +LVWYY +LT++E IL +NGSRIKGW+V+HHY+S  +SG +L WP    Y  FR+QF  F I+ S VQ LQYYYQ+G LY+LRALG    +DLT +G +S   +GL FLLPFL  G+ +Q+YNA+TL+ LS H EC EWQV   A  F  +  GN  T + V+    QK  G+ + P
Sbjct:   10 REWHELEGEFQELQETHRIYKQKL-EELAALQTLCSSSISKQKKHLKDLKLTLQRC-KRHASREEAELVQQMAANIKERQDVFFDMEAYLPKKNGLYLNLVLGNVNVTLLSNQAKFAYKDEYEKFKLYLTII-LLLGAVACRFVLHYRVTDEVFNFLLVWYYCTLTIRESILISNGSRIKGWWVSHHYVSTFLSGVMLTWPNGPIYQKFRNQFLAFSIFQSCVQFLQYYYQRGCLYRLRALGERNHLDLTVEGFQSWMWRGLTFLLPFLFCGHFWQLYNAVTLFELSSHEECREWQVFVLAFTFLILFLGNFLTTLKVVHAKLQKNRGKTKQP 339
The following BLAST results are available for this feature:
BLAST of TCONS_00058318-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
T120B3.131e-7438.44Transmembrane protein 120B OS=Homo sapiens GN=TMEM... [more]
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