TCONS_00058392-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00058392-protein
Unique Name	TCONS_00058392-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	645

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00058392-protein ID=TCONS_00058392-protein|Name=TCONS_00058392-protein|organism=Clytia hemisphaerica|type=polypeptide|length=645bp
MERFKTSSEQNEAIKNFINNLSDVEVDDNIDEGSSDDDFDNDDYNPGAGN
QDEYRRSDVSSDEESLLDTDKERLTSDSNSESDGEVSMSSLPSSPVIPKT
PSPTPSSKSSELLTDPSDIERTPPLSPTSSLPDKPGSPPPSSPTSSLPDI
PRSPPPKEKDSDFSDCEFIEETNTQINTNKKERVTRSTYNQANAETSACR
DPDPKDGATASRGRVGRGGGRAGRRGGRRAGRSGRGVAGRGVSGRGVAGR
GVAGRRVASRVTRRRGPRIRGPGIPRRYASGRQGHSTINDFVENDTDDDN
HDLQPSTEHGTQDSVAEGNFTVKGVVRRAKRKLPQSKKTNKTSGPKKAKT
RAASKKKDEKNLEFVWDTKSRDYREFPFTGDLGIVIETYDPTCPLQILKV
FLTDTLIEDIVKHTNTYAALVRDLPEVKERMANTHRSLFALWTDLTKDEL
WVYFCLQILMGMIHKPRYHLYWSRKFIITTPIFSRLMRRDRFEQIRKMIH
FTDPLSENPEASLSKLDTFFQSLRTKFREVYVPTQHVAVDEYLTLWKGRL
RFRMYIPNKRERYGIKIYMLCESSTGYLSDFIVYTGADTIYPAPDVPLPK
NFLEYTNPSKVVLSLMTGYYNKGYNLALDNLYTSPELLKALYKNG

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_036782	XLOC_036782	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00058392	TCONS_00058392	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR029526	PGBD

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029526	PiggyBac transposable element-derived protein	PFAM	PF13843	DDE_Tnp_1_7	coord: 393..645 e-value: 2.9E-52 score: 178.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..356

Blast

[Close]

BLAST of TCONS_00058392-protein vs. Swiss-Prot (Human)
Match: PGBD4 (PiggyBac transposable element-derived protein 4 OS=Homo sapiens GN=PGBD4 PE=2 SV=3)

HSP 1 Score: 166.777 bits (421), Expect = 3.000e-44
Identity = 95/285 (33.33%), Postives = 156/285 (54.74%), Query Frame = 0

Query:  366 WDTKSRDYRE-FPFTGDLGIVIETYDPTCPLQILKVFLTDTLIEDIVKHTNTYAALVRDLPEVKERMANTHRSLFALWTDLTKDELWVYFCLQILMGMIHKPRYHLYWSRKFIITTPIFSRLMRRDRFEQIRKMIHFTDPLS-----ENPEASLSKLDTFFQSLRTKFREVYVPTQHVAVDEYLTLWKGRLRFRMYIPNKRERYGIKIYMLCESSTGYLSDFIVYTGADTIYPAPDVPLPKNFLEYTNPSKVVLSLMTGYYNKGYNLALDNLYTSPELLKALYKN 644
            W  ++   R+ + FTG  G  ++  D T PLQ  ++F T+ L+  I + TN  AAL+   P   +  +   +     W D   DEL V+F + +L G++ KP   ++WS + ++ TP   ++M  +RF  + + +HF +  S        + SL K+   F  L  KF  VY P +++AVDE L L+KG L  + Y+P KR R+G+K+Y+LCES +GY+ + +V+TG       P + L K+  +    S++VL+L+     +GY + LDN   SP L + L++N
Sbjct:   75 WSARAMIPRQRYDFTGTPGRKVDVSDITDPLQYFELFFTEELVSKITRETNAQAALLASKPPGPKGFSRMDK-----WKDTDNDELKVFFAVMLLQGIVQKPELEMFWSTRPLLDTPYLRQIMTGERFLLLFRCLHFVNNSSISAGQSKAQISLQKIKPVFDFLVNKFSTVYTPNRNIAVDESLMLFKGPLAMKQYLPTKRVRFGLKLYVLCESQSGYVWNALVHTG-------PGMNL-KDSADGLKSSRIVLTLVNDLLGQGYCVFLDNFNISPMLFRELHQN 346

The following BLAST results are available for this feature:

BLAST of TCONS_00058392-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00058392-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
PGBD4	3.000e-44	33.33	PiggyBac transposable element-derived protein 4 OS...	[more]

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TCONS_00058392-protein (polypeptide) - C. hemisphaerica