TCONS_00058418-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058418-protein
Unique NameTCONS_00058418-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length489

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058418-protein ID=TCONS_00058418-protein|Name=TCONS_00058418-protein|organism=Clytia hemisphaerica|type=polypeptide|length=489bp
MGKSKKAQDGVSKFEGFGVDFKCKLIGCTDVPAARGDDICQSAMTKLKMI
AVQKNKEKKEHKQKITVNITLKGIRILDETTERIDHAHPIHRISFISHDN
DDKRTFAYIVGTKEGYKLFAIKSMKEAEQITSTLKSLFQEVFERFQAKKQ
EEQVEEATETKEQPAVVETPVVNEQPSTNNEGNFFDVNEDPTYDNPKDAF
GDWNQLNEQIQVMQNDQPSDGFDMFADTNGYSSTTTNDPFGGDNFTNNST
TTDQNPFDDSSPFNAVDPKQNSAQKDLDFFAAPSVPARPVEQPPTQQTDQ
LYSVVQRPNKTEDDAPLLINDPFAELKKNINEMHKQNQQQPPQPQFGYFP
QQQPMNGTTSPFQQQQGNPFANTQSFGGMQQQNPYQQPIVPPRPVAATPA
PNPFTTTLPAAAPQDEFGWTVTKPVAAPRKAPTPAAPSNPQSDPFAFLNN
QTGPTTNAPVESKPTNGFPAQFSNTSTTSASSDIMDLLG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036806XLOC_036806Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058418TCONS_00058418Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006020PTB/PI_dom
IPR011993PH_dom-like
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006020PTB/PI domainSMARTSM00462PTB_9coord: 16..151
e-value: 8.0E-28
score: 108.4
IPR006020PTB/PI domainPFAMPF00640PIDcoord: 21..147
e-value: 5.8E-17
score: 61.9
IPR006020PTB/PI domainPROSITEPS01179PIDcoord: 18..152
score: 25.374
NoneNo IPR availableGENE3D1.25.40.180coord: 140..377
e-value: 0.0037
score: 16.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 231..270
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 333..489
IPR011993PH domain-likeGENE3D2.30.29.30coord: 14..139
e-value: 2.3E-26
score: 91.8
IPR011993PH domain-likeSUPERFAMILY50729PH domain-likecoord: 13..152

Blast
[Close]
BLAST of TCONS_00058418-protein vs. Swiss-Prot (Human)
Match: DAB2 (Disabled homolog 2 OS=Homo sapiens GN=DAB2 PE=1 SV=3)

HSP 1 Score: 138.658 bits (348), Expect = 6.948e-35
Identity = 61/132 (46.21%), Postives = 91/132 (68.94%), Query Frame = 0 
Query:   11 VSKFEGFGVDFKCKLIGCTDVPAARGDDICQSAMTKLKMIAVQKNKEKKEHKQKITVNITLKGIRILDETTERIDHAHPIHRISFISHDNDDKRTFAYIVGTKEGYKLFAIKSMKEAEQITSTLKSLFQEVF 142
            +++F+G GV +K KLIG  DVP ARGD + Q +M KLK +A    + + +HKQ+I VNI+L GI+I+DE T  I+H HP+++ISFI+ D  D R F Y+ G +  ++ FAIK+ ++AE +   LK LFQ ++
Sbjct:   40 LARFKGDGVKYKAKLIGIDDVPDARGDKMSQDSMMKLKGMAA-AGRSQGQHKQRIWVNISLSGIKIIDEKTGVIEHEHPVNKISFIARDVTDNRAFGYVCGGEGQHQFFAIKTGQQAEPLVVDLKDLFQVIY 170
The following BLAST results are available for this feature:
BLAST of TCONS_00058418-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DAB26.948e-3546.21Disabled homolog 2 OS=Homo sapiens GN=DAB2 PE=1 SV... [more]
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