TCONS_00058562-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058562-protein
Unique NameTCONS_00058562-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length425

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058562-protein ID=TCONS_00058562-protein|Name=TCONS_00058562-protein|organism=Clytia hemisphaerica|type=polypeptide|length=425bp
MLTTSTIDRQKSFLQRRRDLNPNNPNINVMAPDRTDILTQGQKSAFREVF
DLFDSNGGGSIDADELDEALRSADIQVTKDEINEVLSSMDKDGNGEIDFE
EFLQLMTNTERFLESVICKEQEAEATQQREVLLFEALTQFMRKSALHSIN
EIVGYYHQKYKKVQTPHVIRHYAAGARLIGLSEQQIRRHLEQLRRSSMSN
NKSPYAQPPYAFMHLCRQKEVPRPVKLEKITEITEESSPTKIRENLKILV
PDAPRQSTCKGRIRLKIVWDQKEKDEKAGKLPSLIPTKPHETATSQSLRK
KRRHNGWVAQRFNPANIRDHLPILTTNSVKRELKADGGVLIDPDKPHSLD
FDDAPGLRFKVTGLTNQYYKGIQNQKSREAETHWHSLGVNRMPSQHLRES
YRRVFKAYVDYRNTPVSSLCSSSIA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036886XLOC_036886Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058562TCONS_00058562Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 81..109
e-value: 1.3E-7
score: 41.3
coord: 45..73
e-value: 0.0035
score: 26.6
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 45..106
e-value: 1.7E-13
score: 50.8
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 41..76
score: 12.477
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 77..112
score: 14.681
IPR002048EF-hand domainCDDcd00051EFhcoord: 46..107
e-value: 7.10621E-23
score: 90.2997
NoneNo IPR availableGENE3D1.10.238.10coord: 71..94
e-value: 2.4E-13
score: 49.5
NoneNo IPR availableGENE3D1.10.238.10coord: 95..408
e-value: 2.5E-6
score: 26.7
NoneNo IPR availableGENE3D1.10.238.10coord: 34..70
e-value: 1.1E-10
score: 40.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 281..302
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 90..102
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 54..66
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 35..119

Blast
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BLAST of TCONS_00058562-protein vs. Swiss-Prot (Human)
Match: SPT21 (Spermatogenesis-associated protein 21 OS=Homo sapiens GN=SPATA21 PE=2 SV=3)

HSP 1 Score: 81.2629 bits (199), Expect = 1.230e-16
Identity = 65/198 (32.83%), Postives = 94/198 (47.47%), Query Frame = 0 
Query:   38 LTQGQKSAFREVFDLFDSNGGGSIDADELDEALRSADIQVTKDEINEVLSSMDKDGNGEIDFEEFLQLMTNTERFLESVICKEQEAEATQQREVLLFEALTQFMRKSALHS--INEIVGYYHQKYKKVQTPHVIRHYAAGARL--------------IGLSEQQIRRHLEQLRRSSMSNN-KSPYAQPPYAFMHLCRQ 218
            LT  Q+ AFR  F++F  NG G +DA  L   L      VT  ++ + L S D +G+G +DF++FL +MT+T RF  SV        A      LLFE L+  +   AL    + EI  YY +K K+  T       AA  RL                + E+++   L +L++ + + N +SPYAQ P     LC Q
Sbjct:  218 LTLKQEEAFRSYFEIF--NGPGEVDAQSLKNILLLMGFSVTLAQVEDALMSADVNGDGRVDFKDFLAVMTDTRRFFCSVEQNALSDMAPHNPHTLLFEILSLLVEMLALPEAVLEEITNYYQKKLKE-GTCKAQEMEAAVGRLRLQKLPYNPQQEESSEVPERKVLSILSRLKQQNYAPNLQSPYAQVPCIL--LCPQ 410
The following BLAST results are available for this feature:
BLAST of TCONS_00058562-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SPT211.230e-1632.83Spermatogenesis-associated protein 21 OS=Homo sapi... [more]
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