TCONS_00058579-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058579-protein
Unique NameTCONS_00058579-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1789

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058579-protein ID=TCONS_00058579-protein|Name=TCONS_00058579-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1789bp
TTTPTTTATPLSPVTPEFLPFGRSMGDSNVRSGDDTNSCFSVSRNFPLFS
TKNHNQICVTSNGYLTVDNSVSSTSAPLGQRSYAVLAPYTDDMRSSGQNI
FYRTVSDTTTLRWVNSNVARKLSTLSQNDSFNARQAIVVTYDMVERYDNR
NLKYKYQLVLATDFDVTFAIMSYERLDTNGNRPGFSEPPGGNANTVYFTT
STSQNRNLVGTSNIGVRGRHVYLLSKVKCKDCTNPGVMYPYGSLNGDRTY
SRTYDFDQQFRLNGNWKLFSKSRNDLWISSQGYIRLQSGSFSLPATSQYD
YISPYYDPYVNGIRTVYYRESSERNLLANVTRDIKSIERTFTANRVFLVT
YEITGRKFQVALATNGRETYAVLNYEDLDTNPRADVEMNEAGCGRKVFAR
RSNALNFLIKATNTTTGVRGRHAFKLSEDCVNEGVMYPYGRFVGDNSYSS
GSHFTRSVYLNRNWKLFSRPSRQLYFSSMGYLGPQNTNYFTPSTTSYSYL
APFYDRTNNYRESKTLYYRETTDRNLLIKFNEDIQSTGTNFNTTRAYIIT
YVFPARKFQVVLATNDEETYAILNYQELDRDPLTDIELHELGCGNNVFYR
QSNAAYTLIRGNSTGVRGRHVFSLAEKCVNRGVMFSYGSQNGDRTIYRPS
QYIRHRVQLNETFMFFSTPEDKINIHGRGFLTPDPYTQSYLNQGLTYLST
FYSTNSITYDAIYYRDTTDPVLLRELNQAIESNGTMFTPSRAFVVTYIAP
ARKFQTVLATDGSTTYAVLNYEELDANPSEDVQVNEPGCRLKRFISRSNG
AQRLIQTNTSSNTRGRHIFNLTIPGCYKIVSGVRTKEYGRNYVSRGLQLR
TETHNILAANEIGDVDLQFTDLTPLLNYDRQTQVSVVLKSTEKTPVRGRY
QLTYATFTGSQKGLGNLFVKHSHLFVLKNTLKTPSFQYGNLNFSTVESDT
VCQRKNFDLPMMSTPTIKITPIVSFNKFSPTIFVNAWLKDVTVNGFTACI
DETVTFSGKRDVTVNYIAVTEKSNHLSEIQKVHITPKNSHTVCMKQKLQN
IYLSEINVFASVETSSASSQQPVLAWTRLNSNSRYIDVCLKSKQQDTMHK
VHLLVKGDVSPCSNFSCPDHLQCRLASGRQPFCGCIENCTGGQEICGSDY
KSYRSECYLNQQHCRRFGNTSKTEVTIKHYGECQIKPLQSGRTQLEPVAE
LPGVFCKYVNIDSENFVPETGNNTIKVLLSTSWNQQDNFVKANQASATWS
EDITKSGFKACVLVAGRHLATYFSSPPFVHWIAVQNQDFKSDQRVVEVGS
QTMDTWYTGTQCKIMTTLRYDETLYASVSHAKPRSYNNVMTVWIEKERNS
GWWQNVNSRVCARELQNFDGVHDGIVIHWMKVRVRTVRPDVFMPDHIQMN
FPRRTIALGQENPAECKTKIYNNEFPSLSNPTVLVTGTHETGNGSSSSSI
YSQRDFAVWIEQTKGANITVCVKSLRSSITRNELTVNLIVIADLCNGFGT
YHEGSCYKKLPQGLSFDMANAQCLVQGASLPVISSTNEGAFIQENIKGAT
WLNLKRSPPNTGEWGWADGTSFVNGTMWYPGQPTNMKDHNCAVVDNRGIQ
TGWRDEHCSASRSVICEKDARLVERSCESYCANDGICSGNSTGLSCQCRQ
GFYGKRCELNINLINECSNYTTHNEPWRHFENTEGQSNETSCDSRELKHG
WHRFIGQGGSRLYNQCSNSTRKCGTHSPGYLSGTLPKQLAEVRNMRIYFF
TFYCADDYGRVVVRNCGDFMVYSFSYLPSFSCNYGICTY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036893XLOC_036893Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058579TCONS_00058579Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000742EGF-like_dom
IPR001304C-type_lectin-like
IPR002350Kazal_dom
IPR003886NIDO_dom
IPR016186C-type_lectin-like/link
IPR013032EGF-like_CS
IPR018378C-type_lectin_CS
IPR016187CTDL_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0007160cell-matrix adhesion
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007160 cell-matrix adhesion
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000742EGF-like domainSMARTSM00181egf_5coord: 1626..1658
e-value: 0.0051
score: 26.0
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 1623..1658
score: 15.169
IPR001304C-type lectin-likeSMARTSM00034CLECT_2coord: 1495..1617
e-value: 3.6E-20
score: 83.0
IPR001304C-type lectin-likePFAMPF00059Lectin_Ccoord: 1514..1618
e-value: 5.1E-13
score: 49.6
IPR001304C-type lectin-likePROSITEPS50041C_TYPE_LECTIN_2coord: 1502..1617
score: 18.573
IPR002350Kazal domainSMARTSM00280kazal_3coord: 1134..1183
e-value: 0.0016
score: 26.9
IPR002350Kazal domainPFAMPF07648Kazal_2coord: 1135..1183
e-value: 1.8E-5
score: 24.7
IPR002350Kazal domainPROSITEPS51465KAZAL_2coord: 1127..1185
score: 9.6
IPR002350Kazal domainSUPERFAMILY100895Kazal-type serine protease inhibitorscoord: 1133..1183
IPR003886NIDO domainSMARTSM00539ylk_9coord: 700..826
e-value: 0.0026
score: 5.2
coord: 88..229
e-value: 2.6E-5
score: 29.8
coord: 502..629
e-value: 0.0025
score: 5.2
coord: 308..431
e-value: 4.1E-5
score: 27.3
IPR003886NIDO domainPFAMPF06119NIDOcoord: 156..224
e-value: 8.3E-6
score: 26.6
IPR003886NIDO domainPROSITEPS51220NIDOcoord: 88..227
score: 9.044
NoneNo IPR availableGENE3D3.30.60.30coord: 1108..1184
e-value: 2.3E-12
score: 46.8
NoneNo IPR availableGENE3D2.10.25.10coord: 1623..1671
e-value: 1.3E-5
score: 24.6
NoneNo IPR availableCDDcd00037CLECTcoord: 1505..1618
e-value: 1.44344E-21
score: 92.2977
NoneNo IPR availableCDDcd00054EGF_CAcoord: 1627..1658
e-value: 0.0063345
score: 35.6902
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 1624..1660
IPR016186C-type lectin-like/link domainGENE3D3.10.100.10coord: 1467..1622
e-value: 8.8E-26
score: 90.1
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 1646..1657
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 1646..1657
IPR018378C-type lectin, conserved sitePROSITEPS00615C_TYPE_LECTIN_1coord: 1591..1616
IPR016187C-type lectin foldSUPERFAMILY56436C-type lectin-likecoord: 1490..1620

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00058579-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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