TCONS_00058636-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058636-protein
Unique NameTCONS_00058636-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length376

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058636-protein ID=TCONS_00058636-protein|Name=TCONS_00058636-protein|organism=Clytia hemisphaerica|type=polypeptide|length=376bp
MSNYDVIANQPVVIDNGSGVIKAGFAGDQIPKCHFSSFIGRPKHVRVMAG
ALEGDTFIGAKADEYRGLLNIKYPMEHGIVQDWNDMERIWSYIYSKEQLA
TFSEEHPVLLTEAPLNPRRNREKAAELFFETFNVPALFISMQAVLSLYAT
GRTTGVVLDCGDGVTHSVPIYEGFALPHSIMRTDLAGRDVTRYLKLLLKR
EGCTFKTTAEFEIVKKIKEEVCYLALNPLKEEGMEGEKTRYMLPDGSPLD
IGNAKFRAPELLFRPDLLGEEYEGLHEVLAYAIQKSDMDLRKTLYQNIVL
SGGSTLFRGFGDRLLNEVKKVAPKDIKIRISAPQERLYSTWIGGSILASL
DTFKKMWVSKKEYEDEGVKAITRKTF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036945XLOC_036945Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058636TCONS_00058636Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004000Actin
IPR020902Actin/actin-like_CS
IPR004001Actin_CS
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004000Actin familyPRINTSPR00190ACTINcoord: 145..164
score: 82.65
coord: 120..133
score: 62.72
coord: 237..253
score: 44.55
coord: 30..39
score: 30.0
coord: 65..87
score: 63.33
coord: 53..64
score: 24.85
IPR004000Actin familySMARTSM00268actin_3coord: 9..376
e-value: 2.8E-192
score: 654.8
IPR004000Actin familyPFAMPF00022Actincoord: 9..375
e-value: 3.5E-128
score: 427.6
NoneNo IPR availableGENE3D3.30.420.40coord: 8..376
e-value: 2.2E-127
score: 425.1
NoneNo IPR availableCDDcd00012NBD_sugar-kinase_HSP70_actincoord: 12..186
e-value: 6.51367E-17
score: 76.0883
NoneNo IPR availableSUPERFAMILY53067Actin-like ATPase domaincoord: 9..158
NoneNo IPR availableSUPERFAMILY53067Actin-like ATPase domaincoord: 151..376
IPR020902Actin/actin-like conserved sitePROSITEPS01132ACTINS_ACT_LIKEcoord: 109..121
IPR004001Actin, conserved sitePROSITEPS00432ACTINS_2coord: 357..365

Blast
[Close]
BLAST of TCONS_00058636-protein vs. Swiss-Prot (Human)
Match: ACTY (Beta-centractin OS=Homo sapiens GN=ACTR1B PE=1 SV=1)

HSP 1 Score: 648.662 bits (1672), Expect = 0.000e+0
Identity = 300/376 (79.79%), Postives = 346/376 (92.02%), Query Frame = 0 
Query:    1 MSNYDVIANQPVVIDNGSGVIKAGFAGDQIPKCHFSSFIGRPKHVRVMAGALEGDTFIGAKADEYRGLLNIKYPMEHGIVQDWNDMERIWSYIYSKEQLATFSEEHPVLLTEAPLNPRRNREKAAELFFETFNVPALFISMQAVLSLYATGRTTGVVLDCGDGVTHSVPIYEGFALPHSIMRTDLAGRDVTRYLKLLLKREGCTFKTTAEFEIVKKIKEEVCYLALNPLKEEGMEGEKTRYMLPDGSPLDIGNAKFRAPELLFRPDLLGEEYEGLHEVLAYAIQKSDMDLRKTLYQNIVLSGGSTLFRGFGDRLLNEVKKVAPKDIKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEDEGVKAITRKTF 376
            M +YD+IANQPVVIDNGSGVIKAGFAGDQIPK  F +++GRPKH+RVMAGALEGD FIG KA+E+RGLL I+YPMEHG+V+DWNDMERIW Y+YSK+QL TFSEEHPVLLTEAPLNP +NREKAAE+FFETFNVPALFISMQAVLSLYATGRTTGVVLD GDGVTH+VPIYEGFA+PHSIMR D+AGRDV+RYL+LLL++EG  F T+AEFE+V+ IKE  CYL++NP K+E +E EK +Y LPDGS LD+G A+FRAPELLF+PDL+G+E EGLHEV+A+AI KSDMDLR+TL+ NIVLSGGSTLF+GFGDRLL+EVKK+APKDIKI+ISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYE++G +AI RKTF
Sbjct:    1 MESYDIIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHMRVMAGALEGDLFIGPKAEEHRGLLTIRYPMEHGVVRDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVSRYLRLLLRKEGVDFHTSAEFEVVRTIKERACYLSINPQKDEALETEKVQYTLPDGSTLDVGPARFRAPELLFQPDLVGDESEGLHEVVAFAIHKSDMDLRRTLFANIVLSGGSTLFKGFGDRLLSEVKKLAPKDIKIKISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDGSRAIHRKTF 376
The following BLAST results are available for this feature:
BLAST of TCONS_00058636-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ACTY0.000e+079.79Beta-centractin OS=Homo sapiens GN=ACTR1B PE=1 SV=... [more]
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