Sequence
The following sequences are available for this feature:
polypeptide sequence
>TCONS_00058657-protein ID=TCONS_00058657-protein|Name=TCONS_00058657-protein|organism=Clytia hemisphaerica|type=polypeptide|length=724bp MGFNPRFIFLVCLSWHVLILQTVSGNDEIFNGRRYFFGSTNKTWQGAEND CIGRGGHLTSVHSKAENDFLTQQIVSRGGVSNWYGGIRVNNIFTWSDKTP FTTTFWGPGEPNGLLGEDCLHMNTDHLGQWNDLPCNVEFPYVCKLGKANN LPLKNCKLDLGALLDDSGSIGSETEFRKETNFIKSLAKDLTIGPSNTRVS VIKFSTNARLEFKFNDIEGQDRTALYNALDGLSWDGDLTYTVDALELAQK EMFSEANGQRKNVSKVLLVVTDGKSTSGVQAVQRASDVLSKQGVNIIPIG IGNVDQSELEAMATNKSNVFYVNNLSELESAVWGVLEAKCTPIKCHYKKC IYSGWSSWSATCGLIADRSRSLTRSEDAVEERFGGCAGLPTTCENREIET ITLNSCPYTTLAPPTQTQPTPSLVKWGSNEYYFSDVKVTWFEAERLCIAR GGTLATILSLEEDDFMLNQLTKRKPFNERTISYWLDGVKRNMKYVWNDGS EMIYKNLGGGRADEDSYTEGCVSVMYGPGFLVPEPYSWLKGSCTNYGYPI QYVCKGKKLNDSPSITTAATMAPTPEPLPSLVTWGSNEYYFSDVKVNWFE AERLCIARGGTLATILSLEEDDFMLDQLTKRKPFNERTISYWLDGVKRNM KYVWNDGSEMIYKNLGGGRADEDSYTEGCVSVMYGPGFLVPEPYSWLKGS CTNYGYPIQYVXDRVFLFPSLTLG Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following
gene feature:
This polypeptide derives from the following
transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name:
InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
100 200 300 400 500 600 700 Score = 37.71 Score = 30.38 Score = 55.77 Expect = 3.62629E-39 / Score = 141.275 Expect = 5.06847E-15 / Score = 71.4969 Expect = 1.54652E-13 / Score = 66.8745 Expect = 3.06088E-30 / Score = 115.024 Expect = 6.6E-42 / Score = 155.2 Expect = 1.9E-37 / Score = 128.6 Expect = 2.8E-37 / Score = 128.6 Score = 28.85 Score = Expect = 2.8E-26 / Score = 103.3 Expect = 1.1E-13 / Score = 61.4 Expect = 7.8E-11 / Score = 52.0 Expect = 5.8E-17 / Score = 62.3 Expect = 3.3E-9 / Score = 37.3 Expect = 1.4E-8 / Score = 35.4 Score = 13.85 Score = 14.08 Score = 22.426 Expect = 4.2E-34 / Score = 117.3 Expect = 2.8E-21 / Score = 75.4 Expect = 3.3E-19 / Score = 68.6 Score = Score = Score = Score = Sequence PR00453 cd01450 cd00037 cd00037 cd00037 SM00327 G3DSA:3.40.50.410 PF00092 PS50234 SSF53300 SM00034 PF00059 PS50041 PS50041 PS50041 G3DSA:3.10.100.10 G3DSA:3.10.100.10 PS00615 SSF56436 SSF56436 SSF56436
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available PRINTS PR00453 VWFADOMAIN coord: 266..274 score: 55.77 coord: 198..212 score: 30.38 coord: 158..175 score: 37.71
None No IPR available CDD cd01450 vWFA_subfamily_ECM coord: 158..322 e-value: 3.62629E-39 score: 141.275
None No IPR available CDD cd00037 CLECT coord: 431..555 e-value: 5.06847E-15 score: 71.4969
None No IPR available CDD cd00037 CLECT coord: 589..703 e-value: 1.54652E-13 score: 66.8745
None No IPR available CDD cd00037 CLECT coord: 35..144 e-value: 3.06088E-30 score: 115.024
IPR002035 von Willebrand factor, type A SMART SM00327 VWA_4 coord: 157..340 e-value: 6.6E-42 score: 155.2
IPR002035 von Willebrand factor, type A GENE3D 3.40.50.410 coord: 152..344 e-value: 1.9E-37 score: 128.6
IPR002035 von Willebrand factor, type A PFAM PF00092 VWA coord: 159..330 e-value: 2.8E-37 score: 128.6
IPR002035 von Willebrand factor, type A PROSITE PS50234 VWFA coord: 159..336 score: 28.85
IPR002035 von Willebrand factor, type A SUPERFAMILY 53300 vWA-like coord: 149..340
IPR001304 C-type lectin-like SMART SM00034 CLECT_2 coord: 23..144 e-value: 2.8E-26 score: 103.3 coord: 577..710 e-value: 7.8E-11 score: 52.0 coord: 419..555 e-value: 1.1E-13 score: 61.4
IPR001304 C-type lectin-like PFAM PF00059 Lectin_C coord: 595..704 e-value: 1.4E-8 score: 35.4 coord: 437..554 e-value: 3.3E-9 score: 37.3 coord: 41..144 e-value: 5.8E-17 score: 62.3
IPR001304 C-type lectin-like PROSITE PS50041 C_TYPE_LECTIN_2 coord: 584..701 score: 13.85
IPR001304 C-type lectin-like PROSITE PS50041 C_TYPE_LECTIN_2 coord: 426..543 score: 14.08
IPR001304 C-type lectin-like PROSITE PS50041 C_TYPE_LECTIN_2 coord: 30..144 score: 22.426
IPR016186 C-type lectin-like/link domain GENE3D 3.10.100.10 coord: 22..151 e-value: 4.2E-34 score: 117.3
IPR016186 C-type lectin-like/link domain GENE3D 3.10.100.10 coord: 564..709 e-value: 3.3E-19 score: 68.6 coord: 409..561 e-value: 2.8E-21 score: 75.4
IPR018378 C-type lectin, conserved site PROSITE PS00615 C_TYPE_LECTIN_1 coord: 119..143
IPR016187 C-type lectin fold SUPERFAMILY 56436 C-type lectin-like coord: 581..704
IPR016187 C-type lectin fold SUPERFAMILY 56436 C-type lectin-like coord: 23..145
IPR016187 C-type lectin fold SUPERFAMILY 56436 C-type lectin-like coord: 420..555
Blast
BLAST of TCONS_00058657-protein vs. Swiss-Prot (Human)
Match:
CLC4K (C-type lectin domain family 4 member K OS=Homo sapiens GN=CD207 PE=1 SV=2)
HSP 1 Score: 93.2041 bits (230), Expect = 1.708e-20
Identity = 52/133 (39.10%), Postives = 71/133 (53.38%), Query Frame = 0
Query: 19 ILQTVSGNDEIFNGRRYFFGSTNKTWQGAENDCIGRGGHLTSVHSKAENDFLTQQIVSRGGVSNWYGGIR--VNNIFTWSDKTPF----TTTFWGPGEPNGL-LGEDCLHMNTDHLGQWNDLPCNVEFPYVCK 144
ILQ VS + F G Y+F KTW AE C+ R HLTSV S++E +FL + + GG+ W G + + ++W D TPF + FW PGEPN E C ++ L WND PC+ F ++CK
Sbjct: 191 ILQVVSQGWKYFKGNFYYFSLIPKTWYSAEQFCVSRNSHLTSVTSESEQEFLYK---TAGGLIYWIGLTKAGMEGDWSWVDDTPFNKVQSVRFWIPGEPNNAGNNEHCGNIKAPSLQAWNDAPCDKTFLFICK 320
The following BLAST results are available for this feature: