TCONS_00058707-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058707-protein
Unique NameTCONS_00058707-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length138

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058707-protein ID=TCONS_00058707-protein|Name=TCONS_00058707-protein|organism=Clytia hemisphaerica|type=polypeptide|length=138bp
MKMTSKQIPLTCPGHTRPVVDLAFSDSENDEAYFLISGCKDGKPMLRHGE
TGDWIGTFEGHKGAVWGATLNKDATLAATAAADFSVKLWDAVAGKESASF
THKHIAKTVDFSQDGNLLLTGSNEKKMRIFDIQNTDKG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036986XLOC_036986Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058707TCONS_00058707Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 93..131
e-value: 4.5E-4
score: 29.5
coord: 5..48
e-value: 4.1
score: 13.1
coord: 51..90
e-value: 1.1E-5
score: 34.9
IPR001680WD40 repeatPFAMPF00400WD40coord: 55..90
e-value: 3.6E-4
score: 21.2
coord: 98..131
e-value: 0.0041
score: 17.8
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 58..99
score: 12.313
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 99..138
score: 9.606
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 60..137
e-value: 1.7E-18
score: 66.1
NoneNo IPR availableGENE3D2.80.10.50coord: 9..59
e-value: 9.4E-9
score: 35.0
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 77..91
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 12..138
score: 15.294
IPR017986WD40-repeat-containing domainSUPERFAMILY50978WD40 repeat-likecoord: 4..134

Blast
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BLAST of TCONS_00058707-protein vs. Swiss-Prot (Human)
Match: STRAP (Serine-threonine kinase receptor-associated protein OS=Homo sapiens GN=STRAP PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.143e-51
Identity = 92/134 (68.66%), Postives = 104/134 (77.61%), Query Frame = 0 
Query:    3 MTSKQIPLTCPGHTRPVVDLAFSDSENDEAYFLISGCKDGKPMLRHGETGDWIGTFEGHKGAVWGATLNKDATLAATAAADFSVKLWDAVAGKESASFTHKHIAKTVDFSQDGNLLLTGSNEKKMRIFDIQNTD 136
            M  +Q PLTC GHTRPVVDLAFS       YFLIS CKDGKPMLR G+TGDWIGTF GHKGAVWGATLNKDAT AATAAADF+ K+WDAV+G E  +  HKHI KTVDF+QD N LLTG  +K +RI+D+   +
Sbjct:    1 MAMRQTPLTCSGHTRPVVDLAFS-GITPYGYFLISACKDGKPMLRQGDTGDWIGTFLGHKGAVWGATLNKDATKAATAAADFTAKVWDAVSGDELMTLAHKHIVKTVDFTQDSNYLLTGGQDKLLRIYDLNKPE 133
The following BLAST results are available for this feature:
BLAST of TCONS_00058707-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
STRAP1.143e-5168.66Serine-threonine kinase receptor-associated protei... [more]
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