TCONS_00058844-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058844-protein
Unique NameTCONS_00058844-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length129

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058844-protein ID=TCONS_00058844-protein|Name=TCONS_00058844-protein|organism=Clytia hemisphaerica|type=polypeptide|length=129bp
MELLKYLKLSSRLLQLPFVSKKCHGKESNESQIALNHDNVSFFAMFDITI
NCPNQAGLYNLYFHNCMNYDVAEAIKIDLNLKITERNQGTYLSAGQIPLP
TLYFWLSFAFFIAAVCWTVYLRKRRYYYC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037071XLOC_037071Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058844TCONS_00058844Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009637GPR107-like
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009637Lung seven transmembrane receptor-likePFAMPF06814Lung_7-TM_Rcoord: 54..125
e-value: 6.4E-14
score: 51.8

Blast
[Close]
BLAST of TCONS_00058844-protein vs. Swiss-Prot (Human)
Match: GP107 (Protein GPR107 OS=Homo sapiens GN=GPR107 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.398e-19
Identity = 44/108 (40.74%), Postives = 67/108 (62.04%), Query Frame = 0 
Query:   19 VSKKCHGKESNESQIALNHDNVSFFAMFDITINCPNQAGLYNLYFHNCMNYDV-AEAIKIDLNLKITERNQGTYLSAGQIPLPTLYFWLSFAFFIAAVCWTVYLRKRR 125
            V  K  G++S    +  N   VSF   F+I+ +  +Q GLY+LYFH C+  ++ ++     L+++ITE+N  +YLSAG+IPLP LY  ++F FF++   W   LRKRR
Sbjct:  185 VDSKAMGEKS--FSVHNNGGAVSFQFFFNISTD--DQEGLYSLYFHKCLGKELPSDKFTFSLDIEITEKNPDSYLSAGEIPLPKLYISMAFFFFLSGTIWIHILRKRR 288
The following BLAST results are available for this feature:
BLAST of TCONS_00058844-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GP1071.398e-1940.74Protein GPR107 OS=Homo sapiens GN=GPR107 PE=1 SV=1[more]
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