TCONS_00058845-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058845-protein
Unique NameTCONS_00058845-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length159

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058845-protein ID=TCONS_00058845-protein|Name=TCONS_00058845-protein|organism=Clytia hemisphaerica|type=polypeptide|length=159bp
MDSTEEGSAMYNYYFKIVLAVDLLCCGAILLPVIWSIKHLSEAAKTDGKA
AISLQKLKLFRQFYIMIVCYIYTTRIIVRLIKLTIPFQLVWVSELFTELA
TYFFYVWTGLKFRPVNDNPYLHLPQAEDDGEEDIEMNQISTYSGFNEGLT
RVNRADVKT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037072XLOC_037072Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058845TCONS_00058845Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009637GPR107-like
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009637Lung seven transmembrane receptor-likePFAMPF06814Lung_7-TM_Rcoord: 3..119
e-value: 3.9E-22
score: 78.7

Blast
[Close]
BLAST of TCONS_00058845-protein vs. Swiss-Prot (Human)
Match: GP108 (Protein GPR108 OS=Homo sapiens GN=GPR108 PE=2 SV=3)

HSP 1 Score: 181.8 bits (460), Expect = 2.180e-55
Identity = 82/154 (53.25%), Postives = 117/154 (75.97%), Query Frame = 0 
Query:    1 MDSTEEGSAMYNYYFKIVLAVDLLCCGAILLPVIWSIKHLSEAAKTDGKAAISLQKLKLFRQFYIMIVCYIYTTRIIVRLIKLTIPFQLVWVSELFTELATYFFYVWTGLKFRPVNDNPYLHLPQAEDDGEEDIEMNQISTYSGFNEGLTRVNR 154
            ++S EEG++ Y  + +I+  VDL+CCGAIL PV+WSI+HL +A+ TDGK A++L KLKLFR +Y+M++CY+Y TRII  L+++ +PFQ  W+ +L  E +T  F+V TG KF+P  +NPYL LPQ ED  EED++M Q+ T SGF EGL++VN+
Sbjct:  385 IESREEGASDYVLWKEILFLVDLICCGAILFPVVWSIRHLQDASGTDGKVAVNLAKLKLFRHYYVMVICYVYFTRIIAILLQVAVPFQWQWLYQLLVEGSTLAFFVLTGYKFQPTGNNPYLQLPQ-ED--EEDVQMEQVMTDSGFREGLSKVNK 535
The following BLAST results are available for this feature:
BLAST of TCONS_00058845-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GP1082.180e-5553.25Protein GPR108 OS=Homo sapiens GN=GPR108 PE=2 SV=3[more]
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