TCONS_00058898-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058898-protein
Unique NameTCONS_00058898-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length516

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058898-protein ID=TCONS_00058898-protein|Name=TCONS_00058898-protein|organism=Clytia hemisphaerica|type=polypeptide|length=516bp
MNFMKGKISTGGTSTQYETVEDSKDLRIPVQSEEAFEHGINFKCKYIGTE
EIPRPNSRVEIVAAMRRIRYEHKYRNIKKRKVFVDISADGIKVTIRKKKK
KNVKPDESTLFIMQYAINRVFYVSHDSQDLKIFSYIARGEDGVFRCCVFK
ALGKSQAMHVVRTIGQAFEVCHKINKVRDKTTSPTDEKESPIHSDKIDAQ
ITDTDEKSPEETDIDDVCESDIDSPNIKGGTHELQPSTLVTDIDNVRNLN
ELPPPLVPTKQVHGVPMPSLVNGQVGGEKHGAFTLQQIQQLYHQQLLQQI
NEADTARNELSRVRAQLKVEMDARSQAQQQVHRLLAQNREMLVMIQRLMS
QVSDKYAKDNNEPLNETWILSELSSNFSMNSSSNLYKTDSLTNSNLLGSR
NIDFSSQVFDNSNIGPSPSHKNVNVDPITSPFKGAFNPESSGISSQNGSI
STNGGFTSTQDIESNVKASNPFASDAYKLTFGTSFNSSHNPQQTSLNSTM
NSTDIVNNNAKSTLIQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037096XLOC_037096Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058898TCONS_00058898Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006020PTB/PI_dom
IPR011993PH_dom-like
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 293..320
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 435..456
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 486..516
IPR006020PTB/PI domainSMARTSM00462PTB_9coord: 37..181
e-value: 5.6E-24
score: 95.7
IPR006020PTB/PI domainPFAMPF00640PIDcoord: 42..173
e-value: 1.2E-17
score: 64.1
IPR006020PTB/PI domainPROSITEPS01179PIDcoord: 39..173
score: 11.505
IPR011993PH domain-likeGENE3D2.30.29.30coord: 8..175
e-value: 3.5E-40
score: 137.0
IPR011993PH domain-likeSUPERFAMILY50729PH domain-likecoord: 27..176

Blast
[Close]
BLAST of TCONS_00058898-protein vs. Swiss-Prot (Human)
Match: CAPON (Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein OS=Homo sapiens GN=NOS1AP PE=1 SV=3)

HSP 1 Score: 197.208 bits (500), Expect = 8.660e-57
Identity = 124/249 (49.80%), Postives = 162/249 (65.06%), Query Frame = 0 
Query:   13 TSTQYETVEDSKDLRIPVQSEEAFEHGINFKCKYIGTEEIPRPNSRVEIVAAMRRIRYEHKYRNIKKRKVFVDISADGIKVTIRKKKKKNVKP------DESTLFIMQYAINRVFYVSHDSQDLKIFSYIAR-GEDGVFRCCVFKALGKSQAMHVVRTIGQAFEVCHKIN-----KVRDKTTSPTDEKESPIHSDKIDAQITDTDEKS---PEETDID---------DVCE-----SDIDSPNIKGGTH 232
            + T+Y  V+D  DLRIP+ +E+AF+HGI F+ KY+G+ ++PRPNSRVEIVAAMRRIRYE K +NIKK+KV + +S DG+KV ++KKKK  +        DES + +MQ  I R+FYVSHDSQDLKIFSYIAR G   +FRC VFK+  KSQAM +VRT+GQAFEVCHK++     +  D       E+ S    D    Q+T  +  S    EETDID         DV E     +D+D+   +GG+H
Sbjct:    3 SKTKYNLVDDGHDLRIPLHNEDAFQHGICFEAKYVGSLDVPRPNSRVEIVAAMRRIRYEFKAKNIKKKKVSIMVSVDGVKVILKKKKKLLLLQKKEWTWDESKMLVMQDPIYRIFYVSHDSQDLKIFSYIARDGASNIFRCNVFKSKKKSQAMRIVRTVGQAFEVCHKLSLQHTQQNADGQEDGESERNSNSSGDP-GRQLTGAERASTATAEETDIDAVEVPLPGNDVLEFSRGVTDLDAVGKEGGSH 250
The following BLAST results are available for this feature:
BLAST of TCONS_00058898-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CAPON8.660e-5749.80Carboxyl-terminal PDZ ligand of neuronal nitric ox... [more]
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