TCONS_00059152-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00059152-protein
Unique NameTCONS_00059152-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length465

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00059152-protein ID=TCONS_00059152-protein|Name=TCONS_00059152-protein|organism=Clytia hemisphaerica|type=polypeptide|length=465bp
RKDICELKRKSQRKSHNEGVVASNGSTLRDGETSLPEDIPLRDKRDKSNK
VNDKIEQTIRKERQSYAEGLTIHGANRIATGRPLNRILWTILVIASFVAA
VMISKDHFDTFLTRKTIIHTSHIPQQNMTYPAITICDWQGLAREKRHLSG
GPPIFPRPQMVDEDVQLCSFNMSNCGYNGSVLLNVYQTDYDYSNITYLHH
LVTNDDTTNCFSIDAIESHQQMGVLDITALSDRSVNNFWSIMQINPTSET
FPEASTKRYFMGEGSYEALISQKITKLLGEPYTDCVRGNGEYSQNIFTGN
YTIDKCKKGCFLENVFEKCGAIPQMYIKHLREPKRFKNKTLFKVVKGESC
FTSVENDKALLGQCNEKCYLQPCYKEEIIIDLAYHKTRFPNILEISFMFK
SFTIEFAEEVPVYTWQELFSNFGGCVGLMTGASILSLFELCIFFGLIFID
YFDLYNKVKVKSTKT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037250XLOC_037250Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00059152TCONS_00059152Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001873ENaC
Vocabulary: Biological Process
TermDefinition
GO:0006814sodium ion transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005272sodium channel activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006814 sodium ion transport
cellular_component GO:0016020 membrane
molecular_function GO:0005272 sodium channel activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.287.820coord: 277..373
e-value: 7.4E-6
score: 26.1
NoneNo IPR availableGENE3D1.10.287.770coord: 384..450
e-value: 3.2E-12
score: 45.8
NoneNo IPR availableGENE3D1.10.287.770coord: 71..146
e-value: 0.007
score: 16.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..50
IPR001873Epithelial sodium channelPFAMPF00858ASCcoord: 66..139
e-value: 1.1E-12
score: 47.6
coord: 200..443
e-value: 2.0E-19
score: 69.8

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00059152-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top