TCONS_00059236-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00059236-protein
Unique Name	TCONS_00059236-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	176

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00059236-protein ID=TCONS_00059236-protein|Name=TCONS_00059236-protein|organism=Clytia hemisphaerica|type=polypeptide|length=176bp
MPRGRGKNYKGRTRHFTSAEEIDRQMNDDKWRKTREEAEDSEESDSDEEE
GGKKGGVIDIANPNRVQNKMKKVTELEDGDQSGKPELTRREREAIEKEQA
RQKYEKLHAEGKTDEARADLARLAIVKKQREEAAKKKDQEKKDKEAKLVE
AEKARKAAMEAQASAPKPGGRKRGKR

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_037306	XLOC_037306	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00059236	TCONS_00059236	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019380	Casein_kinase_sb_PP28

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 123..161
None	No IPR available	COILS	Coil	Coil	coord: 90..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..117
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..176
IPR019380	Casein kinase substrate, phosphoprotein PP28	PFAM	PF10252	PP28	coord: 62..142 e-value: 4.2E-28 score: 97.5

Blast

[Close]

BLAST of TCONS_00059236-protein vs. Swiss-Prot (Human)
Match: HAP28 (28 kDa heat- and acid-stable phosphoprotein OS=Homo sapiens GN=PDAP1 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.983e-24
Identity = 63/139 (45.32%), Postives = 84/139 (60.43%), Query Frame = 0

Query:   14 RHFTSAEEIDRQMNDDKWRKTREEAEDSEESD---------------------SDEEEGGKKG--GVIDIANPNRVQNKMKKVTELEDGDQSGKPELTRREREAIEKEQARQKYEKLHAEGKTDEARADLARLAIVKKQ 129
            R +TS EEID Q+  +K +K REE E  E  D                      D+ +  +KG  G+IDI NPNRV    KKVT+L   D  G  EL+RRERE IEK++A+++Y K+H  GKT++A+ADLARLAI++KQ
Sbjct:   15 RQYTSPEEIDAQLQAEK-QKAREEEEQKEGGDGAAGDPKKEKKSLDSDESEDEEDDYQQKRKGVEGLIDIENPNRVAQTTKKVTQL---DLDGPKELSRREREEIEKQKAKERYMKMHLAGKTEQAKADLARLAIIRKQ 149

The following BLAST results are available for this feature:

BLAST of TCONS_00059236-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00059236-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
HAP28	2.983e-24	45.32	28 kDa heat- and acid-stable phosphoprotein OS=Hom...	[more]

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TCONS_00059236-protein (polypeptide) - C. hemisphaerica