TCONS_00059293-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00059293-protein
Unique NameTCONS_00059293-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length610

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00059293-protein ID=TCONS_00059293-protein|Name=TCONS_00059293-protein|organism=Clytia hemisphaerica|type=polypeptide|length=610bp
FNNNIKDLLERHIPTVKLTKDQVKSKLKPWITPGIVKSISKRDFYQRKYF
KTKNENYKILYKRYRNSIVSLSRRSKFIYFTNYFNRHSKNMNKVWSGVRD
IISSRTGKSSSPISISIGDKVSSKPAEVANSFNDFFTTIADSIRDKIQPA
NHHFSSFMKNPNQNSIFFTPSTPEEISKIISSFSPSKSSGPNSIPVKILK
LLNQDLSTQISFLINRSFETGIFPSALKISKVVPVFKNKGSPLEVSNYRP
ISLLSNIEKIYEKVAYSRVINFLNRYNQIYSKQFGFRKAHSTIDTLINIT
ERIRERLDKREFACGVFVDLQKAFDTVDHEILLSKLDHYGIRGTENAWFK
SYLSDRSQFVSLSNSQSRLLPIRHGVPQGSVLGPLLFLIYINDLHSCIRT
SETYHFADDTHLLNFAETVWSLCGRVNADLRVLVSWLKANKISLNASKTE
FVIFHSPWKRLDSIPRLKLAGQILTPSKWVKYLGVYLDEHLNWKHHVSTV
ATKLRRANGALSKIRHFVPTKTLINIYHGVFASHVRYAAQIWALCDNTAT
HRIQVLQNSAVGIMTFNGPRVSANPLLNNLDLLNVFDQVKIMNIIYVYKY
FNASLPIESL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037337XLOC_037337Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00059293TCONS_00059293Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 240..486
e-value: 4.2E-42
score: 144.1
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 216..487
score: 21.831
NoneNo IPR availableGENE3D3.30.70.270coord: 231..486
e-value: 1.4E-23
score: 83.0
NoneNo IPR availableCDDcd01650RT_nLTR_likecoord: 230..487
e-value: 3.24116E-46
score: 162.075
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 153..459

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00059293-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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