TCONS_00059349-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00059349-protein
Unique NameTCONS_00059349-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length492

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00059349-protein ID=TCONS_00059349-protein|Name=TCONS_00059349-protein|organism=Clytia hemisphaerica|type=polypeptide|length=492bp
MKIILTLAALISACLASDVLDLGDSNFKDGVANQDIMLVEFFAPWCGHCK
RLAPEYETAATTLKSNDPPVLLAKVDCTEAGKETCSQYGVSGYPTLKIFR
GGEMSADYDGPRDSAGIVTYMKKNAGPSSITLKDAAHFKKKMESAEDMLV
VGFFSEESDLYKQYMKVADQKRSDFAFAHSLDADINKDAGHENEIVLFKP
KHLHAKFEEPKEILNDQSATTGDIVRFIDEKQVGLVGHMTPPKEAFFKKP
QVVVYYNIDWKRDMKGSRYWRNRVARVAKKFVGEIHFAIASRSDYSRQLS
DLALPESKDAVHAVAKNIKGQQFRMSDSYDKFDVANLEKFVIEFKEDKLK
PFIKSEPIPENNDGPVKVVVGETFNEIVNDPTKDVLVEFYAPWCGHCKTL
EPKFNELGEKLAGVKDVVIAKVDATANGVPPPYDVQGFPTLYWAPMGSKD
SPKKYQGGREVNDFIDFIKREATNPVVLEDGKKKKKKAKTDL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037363XLOC_037363Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00059349TCONS_00059349Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005792Prot_disulphide_isomerase
IPR013766Thioredoxin_domain
IPR005788Disulphide_isomerase
IPR017937Thioredoxin_CS
IPR012336Thioredoxin-like_fold
Vocabulary: Molecular Function
TermDefinition
GO:0016853isomerase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005783endoplasmic reticulum
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
cellular_component GO:0005783 endoplasmic reticulum
molecular_function GO:0016853 isomerase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 478..492
NoneNo IPR availablePRINTSPR00421THIOREDOXINcoord: 45..54
score: 65.67
coord: 37..45
score: 56.73
coord: 89..100
score: 46.53
NoneNo IPR availableGENE3D3.40.30.10coord: 235..360
e-value: 3.3E-23
score: 81.7
NoneNo IPR availableGENE3D3.40.30.10coord: 361..492
e-value: 5.2E-35
score: 119.7
NoneNo IPR availableGENE3D3.40.30.10coord: 13..130
e-value: 4.4E-31
score: 106.9
NoneNo IPR availablePFAMPF13848Thioredoxin_6coord: 155..341
e-value: 2.2E-20
score: 73.3
NoneNo IPR availableGENE3D3.40.30.10coord: 131..234
e-value: 3.6E-12
score: 45.9
NoneNo IPR availableSFLDSFLDG00345PDI-likecoord: 371..470
e-value: 1.0E-24
score: 81.3
coord: 21..124
e-value: 7.4E-34
score: 110.7
NoneNo IPR availableCDDcd02961PDI_a_familycoord: 20..121
e-value: 1.92105E-38
score: 135.046
NoneNo IPR availableCDDcd02995PDI_a_PDI_a'_Ccoord: 365..468
e-value: 1.53956E-53
score: 176.208
IPR005792Protein disulphide isomeraseTIGRFAMTIGR01130TIGR01130coord: 17..489
e-value: 1.5E-157
score: 524.0
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 366..470
e-value: 2.7E-27
score: 94.7
coord: 20..123
e-value: 6.8E-30
score: 103.0
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 344..473
score: 14.851
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 4..126
score: 13.779
IPR005788Disulphide isomeraseTIGRFAMTIGR01126TIGR01126coord: 24..124
e-value: 2.8E-35
score: 118.7
coord: 370..471
e-value: 3.8E-33
score: 111.9
IPR017937Thioredoxin, conserved sitePROSITEPS00194THIOREDOXIN_1coord: 38..56
IPR017937Thioredoxin, conserved sitePROSITEPS00194THIOREDOXIN_1coord: 386..404
IPR012336Thioredoxin-like foldSUPERFAMILY52833Thioredoxin-likecoord: 245..363
IPR012336Thioredoxin-like foldSUPERFAMILY52833Thioredoxin-likecoord: 131..232
IPR012336Thioredoxin-like foldSUPERFAMILY52833Thioredoxin-likecoord: 326..470
IPR012336Thioredoxin-like foldSUPERFAMILY52833Thioredoxin-likecoord: 14..126

Blast
[Close]
BLAST of TCONS_00059349-protein vs. Swiss-Prot (Human)
Match: PDIA3 (Protein disulfide-isomerase A3 OS=Homo sapiens GN=PDIA3 PE=1 SV=4)

HSP 1 Score: 469.929 bits (1208), Expect = 1.195e-162
Identity = 248/487 (50.92%), Postives = 342/487 (70.23%), Query Frame = 0 
Query:   17 SDVLDLGDSNFKDGVANQD---IMLVEFFAPWCGHCKRLAPEYETAATTLKSNDPPVLLAKVDCTEAGKETCSQYGVSGYPTLKIFRGGEMSADYDGPRDSAGIVTYMKKNAGPSSITLKDAAHFKKKMESAEDMLVVGFFSEE-SDLYKQYMKVADQKRSDFAFAHS-LDADINKDAGHENEIVLFKPKHLHAKFEEPKEILNDQSATTGDIVRFIDEKQVGLVGHMTPPKEAFFK-KPQVVVYYNIDWKRDMKGSRYWRNRVARVAKKFVGEIH---FAIASRSDYSRQLSDLALPESKDAVHAVA-KNIKGQQFRMSDSYDKFDVANLEKFVIEFKEDKLKPFIKSEPIPENNDGPVKVVVGETFNEIVNDPTKDVLVEFYAPWCGHCKTLEPKFNELGEKLAGVKDVVIAKVDATANGVPPPYDVQGFPTLYWAPMGSKDSPKKYQGGREVNDFIDFIKREATN-PVVLEDGKKKKKKAKTDL 492
            SDVL+L D NF+  +++     +MLVEFFAPWCGHCKRLAPEYE AAT LK   P   LAKVDCT A   TC++YGVSGYPTLKIFR GE +  YDGPR + GIV+++KK AGP+S+ L+    FKK + S +D  +VGFF +  S+ + +++K A   R ++ FAH+ +++ +N+   +   I+LF+P HL  KFE+      +Q  T+G I +FI E   G+  HMT   +   + K  ++ YY++D++++ KGS YWRNRV  VAKKF+   H   FA+ASR  +S +LSD  L  +   +  VA +  KG++F M + + + D   LE+F+ ++ +  LK ++KSEPIPE+NDGPVKVVV E F+EIVN+  KDVL+EFYAPWCGHCK LEPK+ ELGEKL+   ++VIAK+DATAN VP PY+V+GFPT+Y++P   K +PKKY+GGRE++DFI +++REATN PV+ E+  KKKKKA+ DL
Sbjct:   25 SDVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVP---LAKVDCT-ANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRTEEEFKKFI-SDKDASIVGFFDDSFSEAHSEFLKAASNLRDNYRFAHTNVESLVNEYDDNGEGIILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTEDNKDLIQGKDLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRKTFSHELSDFGLESTAGEIPVVAIRTAKGEKFVMQEEFSR-DGKALERFLQDYFDGNLKRYLKSEPIPESNDGPVKVVVAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATANDVPSPYEVRGFPTIYFSPANKKLNPKKYEGGRELSDFISYLQREATNPPVIQEEKPKKKKKAQEDL 505
The following BLAST results are available for this feature:
BLAST of TCONS_00059349-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PDIA31.195e-16250.92Protein disulfide-isomerase A3 OS=Homo sapiens GN=... [more]
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