TCONS_00059382-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00059382-protein
Unique Name	TCONS_00059382-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	511

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00059382-protein ID=TCONS_00059382-protein|Name=TCONS_00059382-protein|organism=Clytia hemisphaerica|type=polypeptide|length=511bp
MREDVFIDLVVLPSTVVDKEWSNSDRAALMKQENLPKTTIHKSIDQVLLP
NDELVFIRGIGGIGKTSLLDMLTFKWAKGEIPDLSAIKFLFKFTCRDLND
TSGKFSNLQELFELKFPEVFESITFDDLMKISDRVLVIVDGMDELKDIYV
QNKPGASSAKSLAQLVFHLLDPKGDWLKNHKVLACGRPKAIEHVKTKLPT
NSKRKTIEVCGFDDENIVKYIDIFFGENMEKATTVKDLITQSYNLRLMAR
VPVFLFVICSAYKDSLLTNSINTQTELYFYSSLIFIRNHFKSKPNQYPNL
MSIIEDRKVVEMLYSIMQLSVTTYMENKVVFNESDIRSLKCRFPIEETGF
ITKYRAGNEQKATYQFRHLVLHEFFTALHLCVTKDIEPFKSNRELSSCKP
TMVGVQRMLETNDNELFVTFYNKLDEICKSRLPLFTKLFHTKTKMETKMS
LFKEFVGAFLKLPSNMIKDGNVLHIDDHNHEHKEFLNLFKESRGGNIISP
ELKSAEITLLS

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_037388	XLOC_037388	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00059382	TCONS_00059382	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR007111	NACHT_NTPase
IPR027417	P-loop_NTPase

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.300		coord: 30..243 e-value: 1.7E-4 score: 20.6
None	No IPR available	PFAM	PF05729	NACHT	coord: 54..225 e-value: 4.4E-19 score: 68.9
IPR007111	NACHT nucleoside triphosphatase	PROSITE	PS50837	NACHT	coord: 53..145 score: 14.403
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 39..236

Blast

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BLAST of TCONS_00059382-protein vs. Swiss-Prot (Human)
Match: NOD2 (Nucleotide-binding oligomerization domain-containing protein 2 OS=Homo sapiens GN=NOD2 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 2.965e-19
Identity = 91/368 (24.73%), Postives = 160/368 (43.48%), Query Frame = 0

Query:   55 VFIRGIGGIGKTSLLDMLTFKWAKGEIPDLSAIKFLFKFTCRDLNDTSGKFSNLQELFE-LKFPEVFESITFDDLMKISDRVLVIVDGMDELKDIYVQNKPGASSA--KSLAQLVFHLLDPKGDWLKNHKVLACGRPKAIEHVKTKLPTNSKRKTIEVCGFDDENIVKYIDIFFGENMEKATTVKDLITQSYNLRLMARVPVFLFVICSAYKDSLLT--NSINTQTELYFYSSLIFIRNHF---KSKPNQYPNLMSIIEDRKVVEMLYSIMQLSVTTYMENKVVFNESDIRSLKCRFPIEETGFITKYRA---GNEQKATYQFRHLVLHEFFTALHLCVTKDIEPFKSNRELSSCKPTMVGVQRMLET 411
            V + G  G GK++LL  L   WA G+  D     F+F F+CR L   +   S    LFE   +P+V +   F  L+   DRVL+  DG DE K  +   +   S     S+  L+F+LL  +G+ LKN + +   RP A+     K      R    + GF ++ I  Y+     E       ++ L+ ++  L  +  +PVF +++   +++ LL    S  T T++Y     + I  HF    + P+     +     R  +  L  + +L++        VF+   +++ +        GF+ + +    G+   A  +F H+    FF A +L ++ D+ P       +  +P    + R+L T
Sbjct:  295 VLVVGEAGSGKSTLLQRLHLLWAAGQ--DFQEFLFVFPFSCRQLQCMAKPLSVRTLLFEHCCWPDVGQEDIFQLLLDHPDRVLLTFDGFDEFKFRFTDRERHCSPTDPTSVQTLLFNLL--QGNLLKNARKVVTSRPAAVSAFLRKY----IRTEFNLKGFSEQGIELYLRKRHHEPGVADRLIR-LLQETSALHGLCHLPVFSWMVSKCHQELLLQEGGSPKTTTDMY-----LLILQHFLLHATPPDSASQGLGPSLLRGRLPTLLHLGRLALWGLGMCCYVFSAQQLQAAQVSPDDISLGFLVRAKGVVPGS--TAPLEFLHITFQCFFAAFYLALSADVPPALLRHLFNCGRPGNSPMARLLPT 646

The following BLAST results are available for this feature:

BLAST of TCONS_00059382-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00059382-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
NOD2	2.965e-19	24.73	Nucleotide-binding oligomerization domain-containi...	[more]

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TCONS_00059382-protein (polypeptide) - C. hemisphaerica