TCONS_00059433-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00059433-protein
Unique NameTCONS_00059433-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length496

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00059433-protein ID=TCONS_00059433-protein|Name=TCONS_00059433-protein|organism=Clytia hemisphaerica|type=polypeptide|length=496bp
MFRPTSEPIIFLYATIYMINLSILPQFVLQKLCLQKHNGNASSCSVSEVE
EVDQELQKSASEWWFIIIASAQIPSVITCLIWGPLSDAIGRRASIYVVPS
VSLIQNLVFVGCAYFATSHMGFVVLGFCLSTLFGQFPGVISLCYGFITEV
TADNKEARIARLAFVDASIFFAGVLSGLGAGQLLERLGFVAVFIFSITIN
TFLLLYITFLLPDLKKLRQKEAMKSTEEEAEELQAINAKAKEAGEENADE
TSSSTSEDSKGSPQKFCLSLLNPYTQIKQVFRVIFAKDTRRMVLPPLLAF
TFSIYAYVGDLTSTALYLKGPPFLMTADYIGYYYAIQACLRGIGVISVTQ
ISHRFLHLSDMNLMLFGIASEAITYTAIGLSKTRTQVYCVNIIGLGLPVA
NALLRGYTTKQVAPENYGALLAAFASLDCLAYTTNAITLEIYRATLDSYP
GAMFVFLGACAGVAFLIMFIFKFYIRRFPAKTPEALMEKSELKSDL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037411XLOC_037411Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00059433TCONS_00059433Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011701MFS
IPR020846MFS_dom
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 216..246
NoneNo IPR availableGENE3D1.20.1250.20coord: 274..472
e-value: 1.4E-8
score: 33.9
NoneNo IPR availableGENE3D1.20.1250.20coord: 2..246
e-value: 2.4E-18
score: 65.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 240..262
IPR011701Major facilitator superfamilyPFAMPF07690MFS_1coord: 10..432
e-value: 3.5E-18
score: 65.5
IPR020846Major facilitator superfamily domainCDDcd06174MFScoord: 66..214
e-value: 7.58506E-6
score: 45.3825
IPR020846Major facilitator superfamily domainSUPERFAMILY103473MFS general substrate transportercoord: 61..229
coord: 272..480

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00059433-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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