TCONS_00059610-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00059610-protein
Unique Name	TCONS_00059610-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	695

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00059610-protein ID=TCONS_00059610-protein|Name=TCONS_00059610-protein|organism=Clytia hemisphaerica|type=polypeptide|length=695bp
MSSPRSPERTIRTPNGSVSYYYYDQSPRRSTGERTNQVTRSPKSSPEHNR
TYETKTYYNEGENEASRSPKRGPGSGNVYSTSRGKRSHLSGEERRSPRRV
IHKQLSNSIALPIIPDKRLTVEEHLSRRLSNSIAFEGIFESEKNNKNNGD
KKTRKNNNDKIENGNSKPVEEEEVSLDDTKNSKNTTKGANDSSASDSTPT
NIDETGENAKLLSVRRIGTPERDRKPGTSAGADSTSSSINDAEAPDVFFP
KRYILAIMMFMGFVNMYAVRVNLNVAIGAMVNNHTVVKNGVAITVAPEFN
WSSRLQGVVLGSFYYGYMFLQIPGGYFALKFGGTRIFGVGVLLASILTIF
TPIATRYSVWALVVLRILEGLVLGVMLPCNHQIWASWAPLPERTTLVTIA
LAGMNVGTVVTMPLTGLLTKYGFDGGWASVFYCFGLFGIVWYILWFLVVH
STPATHPTISKKERQYIENHTVPRKSTNIPWCTMLSSKAVWAVIIGNITN
DWGLYTILICLPIFLMDIMKFDIQTMGFIASLPFLLKAIVGPLGGVIADL
LRYKYMSTINVRRLFFALGSISAAILIVVTGYSHSPIIAVVSMCLGVAMS
GLLHSGYEVNILDIAPGLSGIVMGITNTAGTTTGFLSPLFVGFMTENKLR
SEWIVVFWLTFFIYVIGTILYCLMLSGEAQHWSMDDEDEEARDNM

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_037495	XLOC_037495	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00059610	TCONS_00059610	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011701	MFS
IPR020846	MFS_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1250.20		coord: 250..467 e-value: 2.3E-26 score: 91.9
None	No IPR available	GENE3D	1.20.1250.20		coord: 475..692 e-value: 3.9E-25 score: 87.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..107
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..238
IPR011701	Major facilitator superfamily	PFAM	PF07690	MFS_1	coord: 270..638 e-value: 1.7E-43 score: 148.8
IPR020846	Major facilitator superfamily domain	PROSITE	PS50850	MFS	coord: 254..679 score: 24.585
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 257..674 e-value: 1.09661E-44 score: 162.098
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 240..690

Blast

[Close]

BLAST of TCONS_00059610-protein vs. Swiss-Prot (Human)
Match: VGLU1 (Vesicular glutamate transporter 1 OS=Homo sapiens GN=SLC17A7 PE=2 SV=1)

HSP 1 Score: 365.155 bits (936), Expect = 3.549e-118
Identity = 198/505 (39.21%), Postives = 282/505 (55.84%), Query Frame = 0

Query:  207 ENAKLLSVRRIGTPER---DRKPGT-----SAGADSTSSSINDAEAPDVF---FPKRYILAIMMFMGFVNMYAVRVNLNVAIGAMVNNHTVVKNGVAITVAPEFNWSSRLQGVVLGSFYYGYMFLQIPGGYFALKFGGTRIFGVGVLLASILTIFTPIATRYSVWALVVLRILEGLVLGVMLPCNHQIWASWAPLPERTTLVTIALAGMNVGTVVTMPLTGLLTKYGFDGGWASVFYCFGLFGIVWYILWFLVVHSTPATHPTISKKERQYIENHTV-------PRKSTNIPWCTMLSSKAVWAVIIGNITNDWGLYTILICLPIFLMDIMKFDIQTMGFIASLPFLLKAIVGPLGGVIADLLR-YKYMSTINVRRLFFALGSISAAILIVVTGYSHSPIIAVVSMCLGVAMSGLLHSGYEVNILDIAPGLSGIVMGITNTAGTTTGFLSPLFVGFMTENKLRSEWIVVFWLTFFIYVIGTILYCLMLSGEAQHWSMDDEDEEAR 692
            E  + L+ R +G   R    R+ G      SA     ++   D    D      P+RYI+AIM  +GF   + +R NL VAI +MVNN T  + G  +    +F+W     G++ GSF++GY+  QIPGG+   KF   R+FG  ++  S L +  P A R     ++ +RIL+GLV GV  P  H IW+ WAP  ER+ L T A  G   G VV MPL G+L +Y    GW+SVFY +G FGI WY+ W LV + +PA HP+IS++ER+YIE+          P    + PW    +S  V+A+I+ N    W  Y +LI  P +  ++  F+I  +G +++LP L+  I+ P+GG IAD LR  + MST NVR+L    G    A L++V GYSHS  +A+  + L V  SG   SG+ VN LDIAP  + I+MGI+N  GT +G + P+ VG MT++K R EW  VF +   ++  G I Y +  SGE Q W+  +E  E +
Sbjct:    6 EEFRKLAGRALGKLHRLLEKRQEGAETLELSADGRPVTTQTRDPPVVDCTCFGLPRRYIIAIMSGLGFCISFGIRCNLGVAIVSMVNNSTTHRGGHVVVQKAQFSWDPETVGLIHGSFFWGYIVTQIPGGFICQKFAANRVFGFAIVATSTLNMLIPSAARVHYGCVIFVRILQGLVEGVTYPACHGIWSKWAPPLERSRLATTAFCGSYAGAVVAMPLAGVLVQY---SGWSSVFYVYGSFGIFWYLFWLLVSYESPALHPSISEEERKYIEDAIGESAKLMNPLTKFSTPWRRFFTSMPVYAIIVANFCRSWTFYLLLISQPAYFEEVFGFEISKVGLVSALPHLVMTIIVPIGGQIADFLRSRRIMSTTNVRKLMNCGGFGMEATLLLVVGYSHSKGVAISFLVLAVGFSGFAISGFNVNHLDIAPRYASILMGISNGVGTLSGMVCPIIVGAMTKHKTREEWQYVFLIASLVHYGGVIFYGVFASGEKQPWAEPEEMSEEK 507

The following BLAST results are available for this feature:

BLAST of TCONS_00059610-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00059610-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
VGLU1	3.549e-118	39.21	Vesicular glutamate transporter 1 OS=Homo sapiens ...	[more]

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TCONS_00059610-protein (polypeptide) - C. hemisphaerica