TCONS_00059617-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00059617-protein
Unique NameTCONS_00059617-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length232

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00059617-protein ID=TCONS_00059617-protein|Name=TCONS_00059617-protein|organism=Clytia hemisphaerica|type=polypeptide|length=232bp
MSLNAGKNAAAVEAVNKFVTNNQNIGIGSGSTIVFAVKRLAERVTAENLQ
VKCVPTSFQAKQLITENNLFLSDLEQTLELDIAIDGADEVDIEGNCIKGG
GGCLTQEKIVASCAKTFIVIADSTKSSTKLGEKWKKGVPIEVLPMAYRVV
MLKLEQLGLKPILRMAKSKAGPLVTDNGNFIIDFGFDEISDWKSMNDKII
NIPGVVETGLFIKMHKCAIFGNQDGSITTVNL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037499XLOC_037499Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00059617TCONS_00059617Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004788Ribose5P_isomerase_typA
IPR020672Ribose5P_isomerase_typA_subgr
Vocabulary: Biological Process
TermDefinition
GO:0009052pentose-phosphate shunt, non-oxidative branch
Vocabulary: Molecular Function
TermDefinition
GO:0004751ribose-5-phosphate isomerase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009052 pentose-phosphate shunt, non-oxidative branch
molecular_function GO:0004751 ribose-5-phosphate isomerase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 232..232
NoneNo IPR availableGENE3D3.30.70.260coord: 143..209
e-value: 2.3E-28
score: 97.6
NoneNo IPR availableGENE3D3.40.50.1360coord: 1..142
e-value: 3.4E-46
score: 156.3
NoneNo IPR availableSUPERFAMILY100950NagB/RpiA/CoA transferase-likecoord: 4..154
NoneNo IPR availableSUPERFAMILY75445D-ribose-5-phosphate isomerase (RpiA), lid domaincoord: 134..212
IPR004788Ribose 5-phosphate isomerase, type APFAMPF06026Rib_5-P_isom_Acoord: 53..225
e-value: 1.7E-64
score: 216.4
IPR004788Ribose 5-phosphate isomerase, type ATIGRFAMTIGR00021TIGR00021coord: 9..226
e-value: 3.6E-79
score: 263.1
IPR004788Ribose 5-phosphate isomerase, type ACDDcd01398RPI_Acoord: 7..222
e-value: 3.39247E-100
score: 292.069
IPR020672Ribose-5-phosphate isomerase, type A, subgroupHAMAPMF_00170Rib_5P_isom_Acoord: 3..229
score: 28.567

Blast
[Close]
BLAST of TCONS_00059617-protein vs. Swiss-Prot (Human)
Match: RPIA (Ribose-5-phosphate isomerase OS=Homo sapiens GN=RPIA PE=1 SV=3)

HSP 1 Score: 256.914 bits (655), Expect = 7.080e-86
Identity = 133/222 (59.91%), Postives = 159/222 (71.62%), Query Frame = 0 
Query:    7 KNAAAVEAVNKFVTNNQNIGIGSGSTIVFAVKRLAERVTAENLQVKCVPTSFQAKQLITENNLFLSDLEQTLELDIAIDGADEVDIEGNCIKGGGGCLTQEKIVASCAKTFIVIADSTKSSTKLGEKWKKGVPIEVLPMAYRVVMLKLEQ-LGLKPILRMAKSKAGPLVTDNGNFIIDFGFDEISDWKSMNDKIINIPGVVETGLFIKMHKCAIFGNQDGSI 227
            K  A   AV   V NNQ +GIGSGSTIV AV+R+AERV  ENL + C+PTSFQA+QLI +  L LSDL++  E+D+AIDGADEVD + N IKGGGGCLTQEKIVA  A  FIVIAD  K S  LG++W KG+PIEV+PMAY  V   + Q  G    LRMA +KAGP+VTDNGNFI+D+ FD +  W  +N  I  IPGVV+TGLFI M +   FG QDGS+
Sbjct:   82 KKLAGRAAVENHVRNNQVLGIGSGSTIVHAVQRIAERVKQENLNLVCIPTSFQARQLILQYGLTLSDLDRHPEIDLAIDGADEVDADLNLIKGGGGCLTQEKIVAGYASRFIVIADFRKDSKNLGDQWHKGIPIEVIPMAYVPVSRAVSQKFGGVVELRMAVNKAGPVVTDNGNFILDWKFDRVHKWSEVNTAIKMIPGVVDTGLFINMAERVYFGMQDGSV 303
The following BLAST results are available for this feature:
BLAST of TCONS_00059617-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RPIA7.080e-8659.91Ribose-5-phosphate isomerase OS=Homo sapiens GN=RP... [more]
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