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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00059925-protein ID=TCONS_00059925-protein|Name=TCONS_00059925-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1404bp
MMRILCDHILITLFVFTIVFNFDQNCYVEADTIPPMVTWNQTDYYFSDVE
VDWFEAKRQCNSRGGRLAKILSKEEDDFILSEMAKRLPPSVRIFPHWIDG
IKSNMKYIWSDGSEMVFTHLQIGRSNEDQFPEGCVYVDYGQFTAIRYSWW
THHCTDTFSYICKGKNLTELMSTIGPSSATTNPTIIFDFPTEISSTPTII
SATTAAKISIIPTTAAIPTENTASQIKTISLSLPSWESSYYYFSSIKKPW
IEAELDCNSREGHLTSILSSRELKFLLREYLKHVPKDDSMFWIGGNRHDD
GTWRWRESDSTATFPYQFKDTNLGDCMVIKLNLNFSYWESASCLGSDRRY
ICKIPFHSKTHCREETWNLNDGSSRGYHYPLSPVGTVVSRTCSANGDAKN
FTQTCLRSGQWSFPRGWMENCYTKTTKELIDLRNDTVCTELYQTDCKTPG
EIADKLEDIFDGTKTVTKKDTKAVADIIENISKGIDNVQNETEVESILTK
TITVTSVITSNKVSEEKNLQNVHASLEKIADKAVTFLPVGEEIQISKPNV
GFVGKKIKRGDITIASKVTEKSLQSAILSPANSSTVDNSQFQAFVKIPES
ALDQSKENVSLHSFIYRSDESSAYSKNNQEKLTASHILSITISGQKIRDL
ESPINVTFEVLSKAMNMTPNCSFWDTEKGIWSKQGIRTIQKPKVNSILCQ
TNHLTNFALILDVSQTGANPLALQMITWVGCGISLASLILTVIVFGASRK
LRKRLVTRLIICFSLSLITTLFLFLFGVNETQSKTSCQAIAGLIQYFLLM
TFFWMGAQGINLYNSLVRVMKRKISDTKYFLRSCVVNTVVPALIVIISAS
VKSNSYGGEKFCLVHGMPFYFGLLLPICFIILMNIVLLSLVIYNVHHTPA
NIRSSRKESSKKSYMFKLTKITIACSTLLGIAWLFGVLAVGKLTTVMQYL
FCIFNSLQGLFVLVFYVLTNEEVKKEWLELLGWDDFSIISLSFGAKKGSH
DINTQSTNDQSRNSQSDDTKMGFKGVYNSYSPTSNEETDKEPRYVNPSLL
KQNPAFTMEDEEKDSNVSPYLVPAKILRKSNISDKDDVGLNNTELNDEIE
FQIPEEFHFESPNVSTNQASNRLPEMVTIPQNDFDNEVLQNDSTPELDCY
PKTKTDIFDRPRDEEIKHKQLENDHDSNPKKTSSVDLKNDFPIQTKDQSL
KDKERPHQNTVVNYPDSLQSPTLDSMKTVEPTPKEEPLKGNTALQPDSNL
KTPEYKDSKLLEGVEPTQQRNEENPQRKKKTDKIVPAAEHGTNPLQEEIS
TSKGNEENLILKPENKNHNRQPPKVLEFRPQNTNPASDTTKKDIDARGNF
RKTLKQNILQHKESEGAKDNSDDDDKPTLSLVDQKESVPFRSKALSLSSG
KPCS Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
| GO:0004888 | transmembrane signaling receptor activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
| GO:0007166 | cell surface receptor signaling pathway |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007166 |
cell surface receptor signaling pathway |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
| molecular_function |
GO:0004888 |
transmembrane signaling receptor activity |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR000832 | GPCR, family 2, secretin-like | PRINTS | PR00249 | GPCRSECRETIN | coord: 789..812
score: 28.46
coord: 725..749
score: 29.56
coord: 948..969
score: 32.59
coord: 871..896
score: 20.21
coord: 918..938
score: 25.99 |
| IPR000832 | GPCR, family 2, secretin-like | PFAM | PF00002 | 7tm_2 | coord: 722..962
e-value: 1.3E-33
score: 116.2 |
| IPR000203 | GPS motif | SMART | SM00303 | GPS_3 | coord: 667..716
e-value: 1.3E-8
score: 44.6 |
| IPR000203 | GPS motif | PFAM | PF01825 | GPS | coord: 669..709
e-value: 1.2E-8
score: 35.3 |
| IPR000203 | GPS motif | PROSITE | PS50221 | GPS | coord: 668..716
score: 12.75 |
| IPR001304 | C-type lectin-like | SMART | SM00034 | CLECT_2 | coord: 32..163
e-value: 2.8E-19
score: 80.0
coord: 232..353
e-value: 2.4E-17
score: 73.7 |
| IPR001304 | C-type lectin-like | PFAM | PF00059 | Lectin_C | coord: 52..163
e-value: 9.2E-14
score: 52.0
coord: 247..353
e-value: 5.5E-12
score: 46.3 |
| IPR001304 | C-type lectin-like | PROSITE | PS50041 | C_TYPE_LECTIN_2 | coord: 236..343
score: 14.144 |
| IPR001304 | C-type lectin-like | PROSITE | PS50041 | C_TYPE_LECTIN_2 | coord: 39..163
score: 15.501 |
| IPR016186 | C-type lectin-like/link domain | GENE3D | 3.10.100.10 | | coord: 210..362
e-value: 1.0E-20
score: 73.6 |
| IPR016186 | C-type lectin-like/link domain | GENE3D | 3.10.100.10 | | coord: 23..163
e-value: 7.9E-22
score: 77.2 |
| None | No IPR available | GENE3D | 1.20.1070.10 | | coord: 712..1016
e-value: 7.3E-35
score: 119.8 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1136..1404 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 998..1047 |
| None | No IPR available | CDD | cd00037 | CLECT | coord: 239..354
e-value: 1.60521E-19
score: 85.7493 |
| None | No IPR available | CDD | cd00037 | CLECT | coord: 44..163
e-value: 1.75789E-20
score: 88.4457 |
| None | No IPR available | SUPERFAMILY | 81321 | Family A G protein-coupled receptor-like | coord: 720..983 |
| IPR017981 | GPCR, family 2-like | PROSITE | PS50261 | G_PROTEIN_RECEP_F2_4 | coord: 723..970
score: 25.599 |
| IPR016187 | C-type lectin fold | SUPERFAMILY | 56436 | C-type lectin-like | coord: 39..163 |
| IPR016187 | C-type lectin fold | SUPERFAMILY | 56436 | C-type lectin-like | coord: 236..355 |
Blast
BLAST of TCONS_00059925-protein vs. Swiss-Prot (Human)
Match: AGRL3 (Adhesion G protein-coupled receptor L3 OS=Homo sapiens GN=ADGRL3 PE=1 SV=2) HSP 1 Score: 205.297 bits (521), Expect = 3.147e-53 Identity = 132/379 (34.83%), Postives = 199/379 (52.51%), Query Frame = 0
Query: 650 LESPINVTFEVLSKAM-NMTPNCSFWDTEK----GIWSKQGIRTIQKPKVNSILCQTNHLTNFALIL---DVSQTGA-NPLALQMITWVGCGISLASLILTVIVFGASRKLRK-RLVTRLIICFSLSLITTLFLFLFGVNETQSKTSCQAIAGLIQYFLLMTFFWMGAQGINLYNSLVRVMKRKISDTKYFLRSCVVNTVVPALIVIISASVKSNSYGGEKFCLVH-GMPFYFGLLLPICFIILMNIVLLSLVIYNV-HHTPANIRSSRKESSKKSYMFKLTKITIACSTLLGIAWLFGVLAVGKLTTVMQYLFCIFNSLQGLFVLVFYVLTNEEVKKEWLELLGWDDFSI----ISLSFGAKKGSHDINTQSTNDQSR 1012
L P+ T + + ++ N PNCSFW K G WS QG R + K ++ C NHLTNFA+++ +V + A + L L +ITWVG +SL L++ + F R L+ R +C +SL LFL G+N T +C A L+ +F L F WM +G+ LY LV V + + S KYF +V +PALIV +SA+V SYG +K C + F + + P II++N++ L + +Y + HHT S + KS++ + I + C LLG+ W FG++ + + T +M YLF IFNSLQG+F+ +F+ + ++V+KE+ + L S S+ G GS ST QSR
Sbjct: 783 LADPVVFTVKHIKQSEENFNPNCSFWSYSKRTMTGYWSTQGCRLLTTNKTHTT-CSCNHLTNFAVLMAHVEVKHSDAVHDLLLDVITWVGILLSLVCLLICIFTFCFFRGLQSDRNTIHKNLC--ISLFVAELLFLIGINRTDQPIACAVFAALLHFFFLAAFTWMFLEGVQLYIMLVEVFESEHSRRKYFY---LVGYGMPALIVAVSAAVDYRSYGTDKVCWLRLDTYFIWSFIGPATLIIMLNVIFLGIALYKMFHHTAILKPESGCLDNIKSWV--IGAIALLC--LLGLTWAFGLMYINESTVIMAYLFTIFNSLQGMFIFIFHCVLQKKVRKEYGKCLRTHCCSGKSTESSIGSGKTSGSRTPGRYSTGSQSR 1151
The following BLAST results are available for this feature:
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