TCONS_00059993-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00059993-protein
Unique NameTCONS_00059993-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length404

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00059993-protein ID=TCONS_00059993-protein|Name=TCONS_00059993-protein|organism=Clytia hemisphaerica|type=polypeptide|length=404bp
MNQSYCIDCGFYNQGASWAQSTTCDRCNIPSINCYRRRIEIWSLNTERRT
LICSFDIHPSSYIEDVKQRVSKKTGISFKDYRLYRFREDRPAERESQLME
WHPLDDYETIDYHYSNTVNYGLKVNKYMMVENKAKISIMSNTLPYRVERA
RHKMSNKNSQKIRDRYNINCISTFRLNFLTKTVELKFKNFRLIRDVKIHI
QKEFNIRVGDQVLIYKGKKLMENQLTRDVFLENQINSLRDVSISLVIEKK
PFMLKISPQIRSQSWFSISINDSDNIEEVKQQIQAETEIPIQNIHLIDQK
MQDILCDTKKVEEYKFLDQSVITLQQKLSIRLHFAKDNRVEERVEILPEY
EKRTVLDLLEEIRESFLPKEMNVEEIRYHRYGTLITRIYEIDFRIKKIKK
CSIM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037749XLOC_037749Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00059993TCONS_00059993Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin_dom
IPR029071Ubiquitin-rel_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000626Ubiquitin domainSMARTSM00213ubq_7coord: 172..248
e-value: 2.1
score: 11.5
coord: 252..327
e-value: 0.0027
score: 26.9
IPR000626Ubiquitin domainPFAMPF14560Ubiquitin_2coord: 57..112
e-value: 0.054
score: 13.9
IPR000626Ubiquitin domainPFAMPF00240ubiquitincoord: 180..225
e-value: 7.8E-6
score: 25.4
coord: 263..327
e-value: 4.9E-6
score: 26.1
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 174..234
score: 9.178
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 254..324
score: 8.873
NoneNo IPR availableGENE3D3.10.20.90coord: 253..325
e-value: 2.4E-8
score: 33.3
NoneNo IPR availableGENE3D3.10.20.90coord: 38..125
e-value: 1.5E-4
score: 21.0
NoneNo IPR availableGENE3D3.10.20.90coord: 171..249
e-value: 9.2E-8
score: 31.5
NoneNo IPR availableCDDcd01769UBLcoord: 266..324
e-value: 2.86786E-5
score: 40.7134
NoneNo IPR availableCDDcd01769UBLcoord: 180..220
e-value: 3.70175E-4
score: 37.2466
IPR029071Ubiquitin-related domainSUPERFAMILY54236Ubiquitin-likecoord: 251..328
IPR029071Ubiquitin-related domainSUPERFAMILY54236Ubiquitin-likecoord: 180..228

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00059993-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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