TCONS_00060010-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00060010-protein
Unique NameTCONS_00060010-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length284

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00060010-protein ID=TCONS_00060010-protein|Name=TCONS_00060010-protein|organism=Clytia hemisphaerica|type=polypeptide|length=284bp
MYRNITNPEDACRFMLSLSHVTTSHGKLELSFYIIIFLLIMFSNITLIYG
LVKTKEIKTNTARLLTALSIGDLLTALVHIPTHITFTHLQRKSCIGYSME
SFFAVFLGTSATIITSAMCLDRYLFISRPYKHPKTGTSKYLVIVYLVLAY
SISLSLAISVVIVALSDFGFRLATIFNIISSTIYVLILLTSLVVNTLLYS
YIRNQTKEIKRLSNSHIQQRGYKRKATKTVLIISIIQIFTITPWVISLIY
MTVEFGEKKYLEYMDTIYYAHVWLRMPVFLNSFF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037762XLOC_037762Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00060010TCONS_00060010Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000276GPCR_Rhodpsn
IPR017452GPCR_Rhodpsn_7TM
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004930 G-protein coupled receptor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000276G protein-coupled receptor, rhodopsin-likePRINTSPR00237GPCRRHODOPSNcoord: 61..82
score: 25.39
coord: 104..126
score: 23.25
coord: 28..52
score: 17.64
coord: 181..207
score: 14.36
IPR000276G protein-coupled receptor, rhodopsin-likeSMARTSM013817TM_GPCR_Srsx_2coord: 37..284
e-value: 0.0056
score: -65.7
IPR000276G protein-coupled receptor, rhodopsin-likePFAMPF000017tm_1coord: 44..276
e-value: 1.7E-15
score: 56.9
NoneNo IPR availableGENE3D1.20.1070.10coord: 5..284
e-value: 7.8E-25
score: 86.7
NoneNo IPR availableSUPERFAMILY81321Family A G protein-coupled receptor-likecoord: 2..281
IPR017452GPCR, rhodopsin-like, 7TMPROSITEPS50262G_PROTEIN_RECEP_F1_2coord: 43..284
score: 17.724

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00060010-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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