TCONS_00060243-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00060243-protein
Unique NameTCONS_00060243-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length253

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00060243-protein ID=TCONS_00060243-protein|Name=TCONS_00060243-protein|organism=Clytia hemisphaerica|type=polypeptide|length=253bp
MKRRSVYKTTTEPERIPWHKCLKNGVLTFFDRIYWALNQPLSLKIAVIGP
ENCGKTSIIRRFAGDIFYDEKMNPEDPTFRFTSLMKIRNCSRRFNVKVIE
VDRKDISKQNYDELLQTSAGILLVYSVEEPEKYGEVLSVIDRLHIRRKPK
DNKKEHQVIVALGNKTEICTNLEQVNQNTEMKDELQTKGVDYFSVSAKSN
WGISEAVNELIEQSARNKVMRFSSKKKNKSKRPKKNGKGLLSEDENGVTF
DEL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037896XLOC_037896Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00060243TCONS_00060243Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 155..168
score: 28.92
coord: 43..64
score: 31.92
coord: 192..214
score: 23.87
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 43..217
e-value: 0.0029
score: -69.0
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 40..217
e-value: 0.0064
score: -62.4
NoneNo IPR availableGENE3D3.40.50.300coord: 29..220
e-value: 6.7E-19
score: 67.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 220..253
NoneNo IPR availablePROSITEPS51419RABcoord: 38..249
score: 10.672
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 44..213
e-value: 8.9E-14
score: 51.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 42..224

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00060243-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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