TCONS_00060639-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00060639-protein
Unique NameTCONS_00060639-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length946

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00060639-protein ID=TCONS_00060639-protein|Name=TCONS_00060639-protein|organism=Clytia hemisphaerica|type=polypeptide|length=946bp
MAAAIASGMSKVSFSAKIGILMKATSDDLNPPPGYLYDQISNITKESFDY
CEYLVEFLINRLNKKSLHVKSKVLLVMKYTLEKGNPEFGRLLRRNSQSIQ
DTKIINGSPDPLHGDKFYLDIRQNAEKLLEVLFDMERKAEAPKSTELPYQ
PPIQSSNMSGKMEGFGNTSSSSQSTNQGVGIMKDIYDNVKGAIEGIVKSN
TTSKSTNSLSDSYSSFESNTKSNNISRPSNTLWGVVLPQSSSSSNDFLGT
SNDSNQMKLVPTKASGYDWAQNNIGANSLYNSSKTKTDTPNRYDMNETEK
RLVNEISMVQGIRPQPAKADVDKLIKRCHSLNCEVVIEELSNKLQEEDAR
VQIRVMCVLESMLESTLPDINQLIETKCKETLMKYQTKSHNATRNKANKI
LELLSPKKEQQPDFFAHAPKQSGQSVDLLGGSAGGNAGDLFSGMNVKSTS
TQHQSQEADFNGLNFSMNSSESSASVQDHNNFDPFSQQTSIIPILSKPPE
SNPPMLSKPPSSTQSSQSKPLQSNQNNTPVNTDTDLFAGLNQMSLKDNTT
NILSKDLSYEDPWRFGNDESRNEEGDLHSTPWDNGKPLSLSESQNTANPI
DFVDKAPDFSINTNSTSITTAPIQTSSLAALQSGQDLFGSLSSTNNQNTL
IPASKSDDFDPFNNSLAATPVRNSNNLKSSNSLLTNQHQTSSNILLPSNT
TNSTNSFMADFGNLQSHQKPNETLGGFNLSNSNLLNNSNFAATQKPSTHQ
LIPSASSSHTLNAQQPMTPNTTNQLQTSSMNTQQFMPQPMNPTNRTNFQT
QPNTQMLADSFQQQGQQSFNISSQKPTNLQMNKFPQQQGTRNFNQQQRNM
NNLQQQGANINFQNQMNLNYPQQGGNINFQQQGGAMNFQMSGNQYRYQQQ
QQQQQQQSNFGQPSNLNFMNQGTSSRQSQSSDAFSFVQDAMKANKK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038136XLOC_038136Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00060639TCONS_00060639Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008942ENTH_VHS
IPR013809ENTH
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 836..856
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 894..946
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 201..229
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 462..535
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 564..594
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 744..769
IPR008942ENTH/VHSGENE3D1.25.40.90coord: 19..146
e-value: 2.9E-18
score: 65.7
IPR008942ENTH/VHSGENE3D1.25.40.90coord: 258..420
e-value: 0.0011
score: 18.6
IPR008942ENTH/VHSSUPERFAMILY48464ENTH/VHS domaincoord: 21..137
IPR013809ENTH domainPFAMPF01417ENTHcoord: 23..136
e-value: 2.0E-8
score: 34.3
IPR013809ENTH domainPROSITEPS50942ENTHcoord: 9..142
score: 14.231

Blast
[Close]
BLAST of TCONS_00060639-protein vs. Swiss-Prot (Human)
Match: AP4AT (AP-4 complex accessory subunit Tepsin OS=Homo sapiens GN=TEPSIN PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 2.500e-24
Identity = 63/176 (35.80%), Postives = 94/176 (53.41%), Query Frame = 0 
Query:   11 KVSFSAKIGILMKATSDDLNPPPGYLYDQISNITKESFDYCEYLVEFLINRLNKKSLHVKSKVLLVMKYTLEKGNPEFGRLLRRNSQSIQDTKIINGSPDPLHGDKFYLDIRQNAEKLLEVLFDMERKAEAPKSTELPYQP--PIQSSNMSGKMEGFGNTSSSSQSTNQGVGIMKD 184
            ++SF  ++ IL+K TSDD  P PGYL+++I+ I+ ES    + L+E+L++RL+  S H K KVL ++ Y    G+  F  +L+RNS  IQ+     G PDPLHG+  Y  +R  A+ L   LF           T LP  P  P+ +   +G       + +   ST QG G  K+
Sbjct:   10 RLSFLHRLPILLKGTSDDDVPCPGYLFEEIAKISHESPGSSQCLLEYLLSRLHSSSGHGKLKVLKILLYLCSHGSSFFLLILKRNSAFIQEAAAFAGPPDPLHGNSLYQKVRAAAQDLGSTLFS---------DTVLPLAPSQPLGTPPATGM-----GSQARPHSTLQGFGYSKE 171
The following BLAST results are available for this feature:
BLAST of TCONS_00060639-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AP4AT2.500e-2435.80AP-4 complex accessory subunit Tepsin OS=Homo sapi... [more]
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