TCONS_00061209-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00061209-protein
Unique NameTCONS_00061209-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length518

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00061209-protein ID=TCONS_00061209-protein|Name=TCONS_00061209-protein|organism=Clytia hemisphaerica|type=polypeptide|length=518bp
MSSRITQYKHKALDNSELRRRREEAGVQIRKAKREEQLQKRRNVQPDLEE
SPGLDGVSLLNELPNILNSLMSNDPVQATFMLRKLLSQDTNPPIMEVIEA
GAIPILVQLLQRTDNHILQFEAAWALTNVASGTSEQTAVIVEAGAVPIFI
HLLRSPHEDVREQAVWALGNIAGDNPQCRNFCLECGIMEPLLQLLSQDIA
ISTLRNAVWCLSNLCRGKSPPPEFSQVSPSLPTLAKLLFHEDKFVLTDTC
WAVAYLSDGPNKKIQAVIDVGVCRRLVELLEHPRSKVVSAALRAVGNIVT
GDDLQTQVVLNCNVLPTLISLLNYPKEHIQKETCWALSNITAGNKQQIQA
VIDANIVPSVLNTLSNADYKTRKEAAWVVANITSGGSNQHIRYVASLDAL
KPLSDLLSVDDPKIIIVSLTAIDNILRIGEQIVKEAQNSIVNPYALQIEE
CFGLDKIEYLQQHRNKEIYDKAFNIIEKYFHDSEDQLDIDNAVQPASSSA
GYDFSAGAALDTQGGFKL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038390XLOC_038390Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00061209TCONS_00061209Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000225Armadillo
IPR011989ARM-like
IPR024931Importing_su_alpha
IPR002652Importin-a_IBB
IPR032413Arm_3
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008565protein transporter activity
GO:0005488binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0006606protein import into nucleus
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006606 protein import into nucleus
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
molecular_function GO:0005488 binding
molecular_function GO:0005515 protein binding
molecular_function GO:0008565 protein transporter activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 15..35
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..53
NoneNo IPR availableCDDcd00020ARMcoord: 96..216
e-value: 1.09576E-33
score: 122.423
NoneNo IPR availableCDDcd00020ARMcoord: 349..477
e-value: 2.60866E-13
score: 65.7987
NoneNo IPR availableCDDcd00020ARMcoord: 265..384
e-value: 7.1155E-28
score: 106.63
IPR000225ArmadilloSMARTSM00185arm_5coord: 90..131
e-value: 3.5E-10
score: 49.8
coord: 133..173
e-value: 1.7E-11
score: 54.2
coord: 302..342
e-value: 8.0E-10
score: 48.6
coord: 219..258
e-value: 98.0
score: 5.6
coord: 260..300
e-value: 2.1E-5
score: 34.0
coord: 175..216
e-value: 2.0E-4
score: 30.7
coord: 344..384
e-value: 2.8E-6
score: 36.9
coord: 387..427
e-value: 0.41
score: 19.7
IPR000225ArmadilloPFAMPF00514Armcoord: 303..342
e-value: 1.1E-11
score: 44.3
coord: 261..299
e-value: 5.3E-8
score: 32.5
coord: 91..131
e-value: 5.3E-11
score: 42.1
coord: 175..216
e-value: 2.6E-9
score: 36.7
coord: 133..172
e-value: 4.8E-14
score: 51.7
coord: 344..384
e-value: 3.9E-8
score: 33.0
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 144..172
score: 10.867
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 313..347
score: 9.082
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 101..144
score: 13.387
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 2..485
e-value: 6.2E-113
score: 377.4
IPR024931Importin subunit alphaPIRSFPIRSF005673Importin_alphacoord: 1..518
e-value: 4.5E-199
score: 660.0
IPR002652Importin-alpha, importin-beta-binding domainPFAMPF01749IBBcoord: 4..77
e-value: 2.5E-20
score: 72.5
IPR002652Importin-alpha, importin-beta-binding domainPROSITEPS51214IBBcoord: 1..51
score: 14.88
IPR032413Atypical Arm repeatPFAMPF16186Arm_3coord: 442..492
e-value: 7.0E-22
score: 76.6
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 7..484

Blast
[Close]
BLAST of TCONS_00061209-protein vs. Swiss-Prot (Human)
Match: IMA7 (Importin subunit alpha-7 OS=Homo sapiens GN=KPNA6 PE=1 SV=1)

HSP 1 Score: 550.436 bits (1417), Expect = 0.000e+0
Identity = 287/496 (57.86%), Postives = 363/496 (73.19%), Query Frame = 0 
Query:    4 RITQYKHKALDNSELRRRREEAGVQIRKAKREEQLQKRRNVQPDLEESPGLD------------GVSLLN-ELPNILNSLMSNDPVQATFMLRKLLSQDTNPPIMEVIEA-GAIPILVQLLQRTDNHILQFEAAWALTNVASGTSEQTAVIVEAGAVPIFIHLLRSPHEDVREQAVWALGNIAGDNPQCRNFCLECGIMEPLLQLLSQDIAISTLRNAVWCLSNLCRGKSPPPEFSQVSPSLPTLAKLLFHEDKFVLTDTCWAVAYLSDGPNKKIQAVIDVGVCRRLVELLEHPRSKVVSAALRAVGNIVTGDDLQTQVVLNCNVLPTLISLLNYPKEHIQKETCWALSNITAGNKQQIQAVIDANIVPSVLNTLSNADYKTRKEAAWVVANITSGGSNQHIRYVASLDALKPLSDLLSVDDPKIIIVSLTAIDNILRIGEQIVKEAQNSIVNPYALQIEECFGLDKIEYLQQHRNKEIYDKAFNIIEKYFHDSED 485
            R+  YK+ AL+  E+RRRREE G+Q+RK KRE+QL KRRNV+   EE+   D            G S++  E+  +L S  S+  +  T   RKLLS++ +PPI EVI     +   V+ L+R +N  LQFEAAWALTN+ASGTS+QT +++EAGAVPIFI LL S  EDV+EQAVWALGNIAGD+  CR++ L C I+ PLL LL++   ++  RNAVW LSNLCRGK+PPPEF++VSP LP L++LLF  D  +L D CWA++YLSDGPN+KIQAVID GVCRRLVELL H   KV S ALRAVGNIVTGDD+QTQV+LNC+ LP L+ LL+ PKE I+KE CW +SNITAGN+ QIQAVIDANI P ++  L  A+++TRKEAAW + N TSGG+ + IRY+ SL  +KPL DLL+V D KI+ V+L  ++NILR+GEQ  K +  S VNPY   IEE +GLDKIE+LQ H N+EIY KAF++IE YF   +D
Sbjct:   13 RMKSYKNNALNPEEMRRRREEEGIQLRKQKREQQLFKRRNVELINEEAAMFDSLLMDSYVSSTTGESVITREMVEMLFSDDSDLQLATTQKFRKLLSKEPSPPIDEVINTPRVVDRFVEFLKRNENCTLQFEAAWALTNIASGTSQQTKIVIEAGAVPIFIELLNSDFEDVQEQAVWALGNIAGDSSVCRDYVLNCSILNPLLTLLTKSTRLTMTRNAVWALSNLCRGKNPPPEFAKVSPCLPVLSRLLFSSDSDLLADACWALSYLSDGPNEKIQAVIDSGVCRRLVELLMHNDYKVASPALRAVGNIVTGDDIQTQVILNCSALPCLLHLLSSPKESIRKEACWTISNITAGNRAQIQAVIDANIFPVLIEILQKAEFRTRKEAAWAITNATSGGTPEQIRYLVSLGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQEGKRS-GSGVNPYCGLIEEAYGLDKIEFLQSHENQEIYQKAFDLIEHYFGVEDD 507
The following BLAST results are available for this feature:
BLAST of TCONS_00061209-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
IMA70.000e+057.86Importin subunit alpha-7 OS=Homo sapiens GN=KPNA6 ... [more]
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