TCONS_00061321-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00061321-protein
Unique NameTCONS_00061321-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length195

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00061321-protein ID=TCONS_00061321-protein|Name=TCONS_00061321-protein|organism=Clytia hemisphaerica|type=polypeptide|length=195bp
MANRPKGYGFTAEQANKKAKKFDADQANEALDWIKQVVGDFSCEPVPKEK
GESKFVEPLKDGIVLCKLMNKIKPGSISKINESKMAFKQMENISKFLAEC
EALGMSKIDLFQTVDLYEAQNVPQVVNGIYAVARKARVNGFTGPSLGPDE
ATENKREFSEEQLRSGEGVIGLQAGSNKGASQAGQNFGKTRAIID
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038472XLOC_038472Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00061321TCONS_00061321Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003096SM22_calponin
IPR001715CH-domain
IPR000557Calponin_repeat
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003096Smooth muscle protein/calponinPRINTSPR00888SM22CALPONINcoord: 104..119
score: 50.74
coord: 158..171
score: 50.0
coord: 171..186
score: 69.12
coord: 88..104
score: 42.91
coord: 3..17
score: 42.35
coord: 55..70
score: 58.46
IPR001715Calponin homology domainSMARTSM00033ch_5coord: 26..132
e-value: 5.0E-21
score: 85.9
IPR001715Calponin homology domainGENE3D1.10.418.10coord: 14..181
e-value: 1.1E-33
score: 115.5
IPR001715Calponin homology domainPFAMPF00307CHcoord: 26..136
e-value: 8.3E-22
score: 77.3
IPR001715Calponin homology domainPROSITEPS50021CHcoord: 24..136
score: 16.349
IPR001715Calponin homology domainCDDcd00014CHcoord: 25..137
e-value: 6.6313E-22
score: 85.4403
IPR001715Calponin homology domainSUPERFAMILY47576Calponin-homology domain, CH-domaincoord: 16..180
IPR000557Calponin repeatPFAMPF00402Calponincoord: 170..193
e-value: 4.1E-10
score: 39.0
IPR000557Calponin repeatPROSITEPS01052CALPONIN_1coord: 170..188
IPR000557Calponin repeatPROSITEPS51122CALPONIN_2coord: 170..194
score: 11.146
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 174..195

Blast
[Close]
BLAST of TCONS_00061321-protein vs. Swiss-Prot (Human)
Match: TAGL3 (Transgelin-3 OS=Homo sapiens GN=TAGLN3 PE=1 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 9.192e-47
Identity = 92/202 (45.54%), Postives = 119/202 (58.91%), Query Frame = 0 
Query:    1 MANRPKGYGFTAEQANKKAKKFDADQANEALDWIKQVVGDFSCEPVPKEKGESKFVEPLKDGIVLCKLMNKIKPGS---ISKINESKMAFKQMENISKFLAECEALGMSKIDLFQTVDLYEAQNVPQVVNGIYAVARKARVNG---FTG-PSLGPDEATENKREFSEEQLRSGEGVIGLQAGSNKGASQAGQN-FGKTRAII 194
            MANR   YG + E   K  +K+DAD  N+ +DWI     +    P P   G + F + L DG VLCKL+N + P     I KI+ESKMAFKQME IS+FL   E  G+   D+FQTVDL+E +++  V   + A+   A       + G PS    +A +N+R FSEEQLR G+ VIGLQ GSNKGASQAG   +G  R I+
Sbjct:    1 MANRGPSYGLSREVQEKIEQKYDADLENKLVDWIILQCAEDIEHPPP---GRAHFQKWLMDGTVLCKLINSLYPPGQEPIPKISESKMAFKQMEQISQFLKAAETYGVRTTDIFQTVDLWEGKDMAAVQRTLMALGSVAVTKDDGCYRGEPSWFHRKAQQNRRGFSEEQLRQGQNVIGLQMGSNKGASQAGMTGYGMPRQIM 199
The following BLAST results are available for this feature:
BLAST of TCONS_00061321-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TAGL39.192e-4745.54Transgelin-3 OS=Homo sapiens GN=TAGLN3 PE=1 SV=2[more]
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