TCONS_00061428-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00061428-protein
Unique Name	TCONS_00061428-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	370

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00061428-protein ID=TCONS_00061428-protein|Name=TCONS_00061428-protein|organism=Clytia hemisphaerica|type=polypeptide|length=370bp
VVSSDRLIKSKQTDNSVQSVKLGLETRNGGQTRIIHIIRKNFNSLDKRMS
GKGYSTVQLLADDDESDEELLTTDKNTQLQFQEFSNVPVDTEKENSGFGN
SLLQNSGHDSEGDDNDEAELLSQEKKSPPFWTFEYYQAFFDVDTNQVVSR
ITYSMIPSKQNYLLSKIRPNPDLYGPFWICATLVFTIAICGNLSSFFASE
GDHKWKSDFRLVSLSATVIFLYAWLIPTCIWGFLTWRGNRTGFTYLECVC
VYGYSLSIFVPISILWLIPFDWLRWLLVLVGAVTSGLVIVSTFWRAVEDE
PKNIAVGTVAVIFILHTLLAIGFKLYFFKTIRIIHPAVTTTASTLASTVA
STVHNIVTRSTEDAITPTTG

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_038537	XLOC_038537	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00061428	TCONS_00061428	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006977	Yip1

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006977	Yip1 domain	PFAM	PF04893	Yip1	coord: 140..315 e-value: 4.0E-16 score: 59.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..121

Blast

[Close]

BLAST of TCONS_00061428-protein vs. Swiss-Prot (Human)
Match: YIPF1 (Protein YIPF1 OS=Homo sapiens GN=YIPF1 PE=1 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 9.998e-83
Identity = 134/303 (44.22%), Postives = 187/303 (61.72%), Query Frame = 0

Query:   79 LQFQEFSNV-----------------PVDTEKENSGFGNSLLQNSGHDSE-----GDDNDEAELLSQEKKSPPFWTFEYYQAFFDVDTNQVVSRITYSMIP-SKQNYLLSKIRPNPDLYGPFWICATLVFTIAICGNLSSFFASEGD--HKWKSDFRLVSLSATVIFLYAWLIPTCIWGFLTWRGNRT----GFTYLECVCVYGYSLSIFVPISILWLIPFDWLRWLLVLVGAVTSGLVIVSTFWRAVEDEPKNIAVGTVAVIFILHTLLAIGFKLYFFKTIRIIHPAVTTTASTLASTVAST 352
            LQF+EF N                  P +T K   G      + SG + +      DD+D+ ELL+ +KKS PFWTFEYYQ FFDVDT QV  RI  S++P   +N++   IR NPDLYGPFWICATLVF IAI GNLS+F    G+  + +  +FR VS++AT+I+ YAWL+P  +WGFL WR ++      +++LE VCVYGYSL I++P +ILW+IP   +RW+LV++    SG ++  TFW AV ++ + +A+ T+  I +LH LL++G   YFF    + H  + TT +T   TVA+ 
Sbjct:    7 LQFEEFGNAATSLTANPDATTVNIEDPGETPKHQPGSP----RGSGREEDDELLGNDDSDKTELLAGQKKSSPFWTFEYYQTFFDVDTYQVFDRIKGSLLPIPGKNFVRLYIRSNPDLYGPFWICATLVFAIAISGNLSNFLIHLGEKTYHYVPEFRKVSIAATIIYAYAWLVPLALWGFLMWRNSKVMNIVSYSFLEIVCVYGYSLFIYIPTAILWIIPQKAVRWILVMIALGISGSLLAMTFWPAVREDNRRVALATIVTIVLLHMLLSVGCLAYFFDAPEMDH--LPTTTATPNQTVAAA 303

The following BLAST results are available for this feature:

BLAST of TCONS_00061428-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00061428-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
YIPF1	9.998e-83	44.22	Protein YIPF1 OS=Homo sapiens GN=YIPF1 PE=1 SV=1	[more]

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TCONS_00061428-protein (polypeptide) - C. hemisphaerica