TCONS_00061470-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00061470-protein
Unique Name	TCONS_00061470-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	579

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00061470-protein ID=TCONS_00061470-protein|Name=TCONS_00061470-protein|organism=Clytia hemisphaerica|type=polypeptide|length=579bp
MSFTTDDDDHDGAMDITTPLIDKQPQKMSTYGQSTSLSGSFGADESENEI
RNKLQWYFKNPYEKYKQKKRKPAKLVLQIIKIILVTVQAIFFATDEFQLV
TFRTDNIETFRQLFLLHYDGHERQELFLKDSVYQHMHHTWLQYYQYQSLM
IGTYHTPIQSIKLCVEESVIAETIKPNGTFPWSKAHPCYHLKPPKESVEK
ITWQEFKEDNRLPKHFELISRLRMIFEFQVNYTVLHRSNSPDCYQFNITV
LYDNSDLDGEMAVTLDSEIDFHQCRITTGLHIREQSWWNYTTLFDIVVIL
ICIISFILCLRSFRRHYRLCKAAEFFFKDYRHEKFTFTDKLNFINFWLVL
IAVSDICIIAGSTIKIVLDWLEYPELYDACSLSFGIAVLFSWVGILRYLG
FMQGYNVLLVTLKTSFPSIIRFIICSSLIYIGFTICGWIVLGPYHYKFVN
LYVTSECLFALVNGDDMYTTFHSIVQDDSDPLIWYFNKVYLYVFISLFIY
VVLSLFIGIVADTYERIKDYGHPPKTRIELFMEGKEYANAEHQHRHGGCK
QHLHHHRNRPGEGSGDEDMSINNQYIPSL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_038556	XLOC_038556	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00061470	TCONS_00061470	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005821	Ion_trans_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005216	ion channel activity

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport
GO:0006811	ion transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006811	ion transport
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016020	membrane
molecular_function	GO:0005216	ion channel activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005821	Ion transport domain	PFAM	PF00520	Ion_trans	coord: 292..519 e-value: 5.2E-7 score: 29.0
None	No IPR available	GENE3D	1.10.287.70		coord: 74..519 e-value: 4.9E-7 score: 28.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 548..571

Blast

[Close]

BLAST of TCONS_00061470-protein vs. Swiss-Prot (Human)
Match: MCLN2 (Mucolipin-2 OS=Homo sapiens GN=MCOLN2 PE=1 SV=2)

HSP 1 Score: 308.916 bits (790), Expect = 6.315e-98
Identity = 179/520 (34.42%), Postives = 278/520 (53.46%), Query Frame = 0

Query:   43 ADESENEIRNKLQWYFKNPYEKYKQKKRKPAKLVLQIIKIILVTVQAIFFATDEFQLVTFRTDNIETFRQLFLLHYDGHERQE----LFLKDSVYQHMHHTWLQYYQYQSLMIGTYHTPIQ-----SIKLCVEESVIAETIKPNGTFPWSK--AHPCYHLKPPKESVEKITWQEFKEDNRLPKHFELISRLRMIFEFQ-VNYTVLHRSNSPDCYQFNITVLYDNSDLDGEMAVTLDSEIDFHQCRITTGLHIREQSWWNYTTLFDIVVILICIISFILCLRSFRRHYRLCKAAEFFFKDYRHEKFTFTDKLNFINFWLVLIAVSDICIIAGSTIKIVLDWLEYPELYDACSLSFGIAVLFSWVGILRYLGFMQGYNVLLVTLKTSFPSIIRFIICSSLIYIGFTICGWIVLGPYHYKFVNLYVTSECLFALVNGDDMYTTFHSIVQDDSDPLIWYFNKVYLYVFISLFIYVVLSLFIGIVADTYERIKDYGHP--PKTRIELFMEGKEYANAEHQHRHGG 548
            ++  E  +R  L++YF +P EKY+ +++ P KL LQI+KI++VT Q + F      +V F+ DN   F+ LFL  Y G +  +    ++ ++  Y+ +     QY+Q + + +GT            +K+C +          N T          C  L     S +   W   K  +     F  + ++ + F  + ++   +H    PDCY F  T+++DN    G++ +  DS+    +C+    +    Q    Y  +FD  VI+IC+ S ILC RS     RL K    FF +        TD+  FIN W VL+ +SD+  I GS +K+ +        YD CS+  G + L  WVG++RYLG+ Q YNVL++T++ S P ++RF  C+ +IY+G+T CGWIVLGPYH KF NL   +ECLF+LVNGDDM+ TF  I Q     L+W F+++YLY FISLFIY++LSLFI ++ D+Y+ IK +     P+T ++ F+  KE ++ E   +   
Sbjct:   34 SEMKEECLREDLKFYFMSPCEKYRARRQIPWKLGLQILKIVMVTTQLVRFGLSNQLVVAFKEDNTVAFKHLFLKGYSGTDEDDYSCSVYTQEDAYESIFFAINQYHQLKDITLGTLGYGENEDNRIGLKVCKQHYKKGTMFPSNETLNIDNDVELDCVQLDLQDLSKKPPDW---KNSSFFRLEFYRLLQVEISFHLKGIDLQTIHSRELPDCYVFQNTIIFDNKAHSGKIKIYFDSDAKIEECK-DLNIFGSTQKNAQYVLVFDAFVIVICLASLILCTRSIVLALRLRKRFLNFFLEKYKRPVCDTDQWEFINGWYVLVIISDLMTIIGSILKMEIKAKNLTN-YDLCSIFLGTSTLLVWVGVIRYLGYFQAYNVLILTMQASLPKVLRFCACAGMIYLGYTFCGWIVLGPYHDKFENLNTVAECLFSLVNGDDMFATFAQIQQ--KSILVWLFSRLYLYSFISLFIYMILSLFIALITDSYDTIKKFQQNGFPETDLQEFL--KECSSKEEYQKESS 544

The following BLAST results are available for this feature:

BLAST of TCONS_00061470-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00061470-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
MCLN2	6.315e-98	34.42	Mucolipin-2 OS=Homo sapiens GN=MCOLN2 PE=1 SV=2	[more]

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TCONS_00061470-protein (polypeptide) - C. hemisphaerica