TCONS_00061676-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00061676-protein
Unique Name	TCONS_00061676-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	355

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00061676-protein ID=TCONS_00061676-protein|Name=TCONS_00061676-protein|organism=Clytia hemisphaerica|type=polypeptide|length=355bp
MDKNSNGGVKAECNKKAIEYLQSIDFKALGRTVFTDHLATVSEAGKNIGE
LTVSVSETVRGDEICYYVHAQSHGVLDGVPMGTSVTAYITRGVVTLEQTQ
HEYIKFTNKPLDKKTIVVKEGDKLRVKKITSAGRDVSENELTYTLNHEKG
FVSEGANIILQRIMCQRNDVPENAKFLALDNASCLTTMRYAKLPERTTTI
ADSTLALFGIEREVLGMESLTVRWNTHFLEGGYMATRETIGSSVRMQLIQ
LPTKDGQPKKGEKSVSARNDLHWEADMQMTSHYIERKEKLINDHKTYVRH
KPELRALLEDFCQFVLLRKPDDVCSFASDYFASFSTKIKPPTLPSNAEEK
QRLSP

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_038675	XLOC_038675	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00061676	TCONS_00061676	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003117	cAMP_dep_PK_reg_su_I/II_a/b

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.890.10		coord: 302..335 e-value: 1.7E-8 score: 33.4
IPR003117	cAMP-dependent protein kinase regulatory subunit, dimerization-anchoring domain	SUPERFAMILY	47391	Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit	coord: 298..335

Blast

[Close]

BLAST of TCONS_00061676-protein vs. Swiss-Prot (Human)
Match: CATIP (Ciliogenesis-associated TTC17-interacting protein OS=Homo sapiens GN=CATIP PE=1 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 1.533e-61
Identity = 107/328 (32.62%), Postives = 181/328 (55.18%), Query Frame = 0

Query:   12 ECNKKAIEYLQSIDFKALGRTVFTDHLATVSEAGKNIGELTVSVSETVRGDEI-----CYYVHAQSHGVLDGVPMGTSVTAYITRGVVTLEQTQHEYIKFTNKPLDKKTIVVKEGDKLRVKKITSAGRDVSENELTYTLNHEKGFVSEGANIILQRIMCQRNDVPENAKFLALDNASCLTTMRYAKLPERTTTIADSTLALFGIEREVLGMESLTVRWNTHFLEGGYMATRETIGSSVRMQLIQLPTKDGQPKKGEKSVSARNDLHWEADMQMTSHYIERKEKLINDHKTYVRHKPELRALLEDFCQFVLLRKPDDVCSFASDYFASF 334
            E N +AI++L S+  + L    F++ LA VS+ G+  GELT+ V      +++     C +VHA S G LD +  G S+  Y++  +  +EQ   ++IKF   P+++K  ++K+ D+L V +    G +V     ++  +  KGF+SE AN++L R+M  R  VP NA+FL LD    L  + Y  L  +T  +      +F +E+ V   E + +    + L  G++A R  +GS     + ++P    + +   + V  +  L WE DM++ S +++RKE+L   H +Y+R  PE  AL+ DF  F+LLR+P+DV +FA+++F  F
Sbjct:   27 EANAEAIDFLSSLHKEELQMLFFSETLAMVSDTGEPQGELTIEVQRGKYQEKLGMLTYCLFVHASSRGFLDKMLCGNSLLGYLSEKLELMEQHSQDFIKFLILPMERKMSLLKQDDQLAVTRSIKEGEEVKTGVTSFPWSSIKGFISEAANLVLLRVMAWRRMVPSNARFLTLDTEGKLCYLTYQNLGFQTIQVDHQQAEVFIVEQTVHAEEGIPMSCQYYLLSDGHLAKRIQVGSPGCCIITKMPILREEDEIEPRPVFEKKPLVWEEDMELYSKFLDRKEELRLGHASYLRQHPEAHALISDFLLFLLLRQPEDVVTFAAEFFGPF 354

The following BLAST results are available for this feature:

BLAST of TCONS_00061676-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00061676-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CATIP	1.533e-61	32.62	Ciliogenesis-associated TTC17-interacting protein ...	[more]

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TCONS_00061676-protein (polypeptide) - C. hemisphaerica