TCONS_00061679-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00061679-protein
Unique Name	TCONS_00061679-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	566

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00061679-protein ID=TCONS_00061679-protein|Name=TCONS_00061679-protein|organism=Clytia hemisphaerica|type=polypeptide|length=566bp
VFGAQVLQQMTCKMEEEFKDPLMASSAKKEEGADEPQNTEFDVIYKVNDN
PPWYLAIVLGFQQYMTMFGSTIAVPFILAGPLCIADNNLAKSELISTIFL
VSGIATLIQSCLGTRLPIVQGATFSFIGPTIAILNLPEYKCPTAVNGTVP
DYDWKIGMREIQGAIAVSSLFQVFVGCTGIIGFVMRFIGPLTVAPTIALV
GLALFGAAGSFASEQWGIAALTVFCIALFSQVLGKKFAVFRLFPVILAIL
ISWALSGIITAAGGYKEGSEARTDHNLEVLNQAKWIRVPYPGQWGTPTVH
VAGVFGMLAGVFASMIESIGDYYACARLSGAPPPPKHAVNRGIFLEGISC
VLAGLFGSGNGTTSYSENIAAIGVTKVASRRVIQIGAIFMIILSILGKFG
AVFTLIPKPVIGGMFWCLFGLIVAVGLSSLQFVNLNDSRNLFVLGFSFFN
GMVVPSWISANPQAIDTGVTELDQIIGVLLGTNMAVGGITACLLDNILPG
SKKDRGIEAWRDNEASAEENSATYDLPYIQKYLDRTSWIRYVPFLPYNGN
RSGTEQNNQYNMQEVA

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_038677	XLOC_038677	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00061679	TCONS_00061679	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006043	Xant/urac/vitC
IPR006042	Xan_ur_permease

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport
GO:0006810	transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0005215	transporter activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0006810	transport
cellular_component	GO:0016020	membrane
molecular_function	GO:0005215	transporter activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006043	Xanthine/uracil/vitamin C permease	PFAM	PF00860	Xan_ur_permease	coord: 57..458 e-value: 4.7E-85 score: 285.5
IPR006042	Xanthine/uracil permease	PROSITE	PS01116	XANTH_URACIL_PERMASE	coord: 406..426

Blast

[Close]

BLAST of TCONS_00061679-protein vs. Swiss-Prot (Human)
Match: S23A1 (Solute carrier family 23 member 1 OS=Homo sapiens GN=SLC23A1 PE=1 SV=3)

HSP 1 Score: 509.99 bits (1312), Expect = 6.304e-176
Identity = 262/562 (46.62%), Postives = 367/562 (65.30%), Query Frame = 0

Query:   29 KEEGADEPQNTEFDVIYKVNDNPPWYLAIVLGFQQYMTMFGSTIAVPFILAGPLCIADNNLAKSELISTIFLVSGIATLIQSCLGTRLPIVQGATFSFIGPTIAILNLPEYKCPTAV----NGTVP---DYDWKIGMREIQGAIAVSSLFQVFVGCTGIIGFVMRFIGPLTVAPTIALVGLALFGAAGSFASEQWGIAALTVFCIALFSQVL------------GK-----KFAVFRLFPVILAILISWALSGIIT-----AAGGYKEGSEARTDHNLEVLNQAKWIRVPYPGQWGTPTVHVAGVFGMLAGVFASMIESIGDYYACARLSGAPPPPKHAVNRGIFLEGISCVLAGLFGSGNGTTSYSENIAAIGVTKVASRRVIQIGAIFMIILSILGKFGAVFTLIPKPVIGGMFWCLFGLIVAVGLSSLQFVNLNDSRNLFVLGFSFFNGMVVPSWISANPQAIDTGVTELDQIIGVLLGTNMAVGGITACLLDNILPGSKKDRGIEAWRDNEASAEENSA---TYDLPYIQKYLDRTSWIRYVPFLPYNGNRSGTEQNN 558
            ++     P   +FD++YK+ D PPWYL I+LGFQ Y+T F  TIAVPF+LA  LC+  +    S+LI TIF   GI TLIQ+ +G RLP+ Q + F+F+ P  AIL L  +KCP       N ++P    + W   +RE+QGAI VSS+ +V +G  G+ G ++ +IGPLTV PT++L+GL++F AAG  A   WGI+A ++  I LFSQ L            GK     +  +F++FP++LAI+  W L  ++T            G +ARTD   +++  A WIR+PYP QWG PTV  A V GM +   A +IESIGDYYACARL+GAPPPP HA+NRGIF EGI C++AGL G+GNG+TS S NI  +G+TKV SRRV+Q GA  M++L  +GKF A+F+ +P P++GGMF  LFG+I AVGLS+LQFV++N SRNLFVLGFS F G+ +P+++ +NP AI+TG+ E+DQI+ VLL T M VGG  A +LDN +PGS ++RG+  W+    +  + S+   +YD P     + R ++++Y+P  P     S + ++ 
Sbjct:   17 RDPSTPLPTEPKFDMLYKIEDVPPWYLCILLGFQHYLTCFSGTIAVPFLLAEALCVGHDQHMVSQLIGTIFTCVGITTLIQTTVGIRLPLFQASAFAFLVPAKAILALERWKCPPEEEIYGNWSLPLNTSHIWHPRIREVQGAIMVSSVVEVVIGLLGLPGALLNYIGPLTVTPTVSLIGLSVFQAAGDRAGSHWGISACSILLIILFSQYLRNLTFLLPVYRWGKGLTLLRIQIFKMFPIMLAIMTVWLLCYVLTLTDVLPTDPKAYGFQARTDARGDIMAIAPWIRIPYPCQWGLPTVTAAAVLGMFSATLAGIIESIGDYYACARLAGAPPPPVHAINRGIFTEGICCIIAGLLGTGNGSTSSSPNIGVLGITKVGSRRVVQYGAAIMLVLGTIGKFTALFSSLPDPILGGMFCTLFGMITAVGLSNLQFVDMNSSRNLFVLGFSMFFGLTLPNYLESNPGAINTGILEVDQILIVLLTTEMFVGGCLAFILDNTVPGSPEERGLIQWKAGAHANSDMSSSLKSYDFPIGMGIVKRITFLKYIPICPVFKGFSSSSKDQ 578

The following BLAST results are available for this feature:

BLAST of TCONS_00061679-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00061679-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
S23A1	6.304e-176	46.62	Solute carrier family 23 member 1 OS=Homo sapiens ...	[more]

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TCONS_00061679-protein (polypeptide) - C. hemisphaerica