TCONS_00061739-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00061739-protein
Unique NameTCONS_00061739-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length598

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00061739-protein ID=TCONS_00061739-protein|Name=TCONS_00061739-protein|organism=Clytia hemisphaerica|type=polypeptide|length=598bp
MDYNTVKKMKVNELKSFLRLRDMRLSGNKENLRARVLVAIENGVKPVKTA
EEIEGELLREYNDKLTCKGISIPDPFNLQDGWKPEAIGVKEWPMISTLYI
IKFLMLDETIGDLNDYKKSKAYSYFERGWLGKIDFHPLKDTPFCLMRTDC
RPSQRISDTLHKLWLLFSKDTGNVLEAHCTCMAGMGSSCNHVAAALFRIE
AAMRYGLSNPSSTSLPNEWLPNRNEVQPSKAKNIDFNRDDFAKRGKSRKK
LFSTPKKNYHPLPIKRKTTKTLSFEKIVETLKEKDLMKDTTLSTAAPQPE
IDFVVESVRKPDHVSDLPCIDDVIVVESVRKPDHVSNLPCIDDVILTSKS
TDEFLTNVTNDLTNDIIDKIEVATKGQSTNELWYQHRKSVITASKVHEVK
TKMETIKGYQKGDERSEVLMWSLTKKIAGFTFLNPNNPALKYGREMEGMA
SSKLLDFLKTKHKGAKIRDCGLLLHKNKPFIGASPDGIFSCDCCKEEVCI
EIKCPYSISYLSPTDENAKLRYMIKTDQGLRLRESHQYFSQCQFQMGVWN
LKKCFFFVYTAHGFILNEIRFDTNFFSELSEKCSNFYKEYYLPSIFLA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038729XLOC_038729Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00061739TCONS_00061739Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003034SAP_dom
IPR011604Exonuc_phg/RecB_C
IPR019080YqaJ_viral_recombinase
IPR007527Znf_SWIM
IPR011335Restrct_endonuc-II-like
Vocabulary: Molecular Function
TermDefinition
GO:0004518nuclease activity
GO:0003677DNA binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
molecular_function GO:0004518 nuclease activity
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003034SAP domainSMARTSM00513sap_9coord: 6..40
e-value: 8.5E-5
score: 31.9
IPR003034SAP domainGENE3D1.10.720.30coord: 2..55
e-value: 3.3E-8
score: 33.0
IPR003034SAP domainSUPERFAMILY68906SAP domaincoord: 5..40
IPR011604Exonuclease, phage-type/RecB, C-terminalGENE3D3.90.320.10coord: 356..592
e-value: 8.9E-44
score: 148.8
IPR019080YqaJ viral recombinasePFAMPF09588YqaJcoord: 383..548
e-value: 5.8E-13
score: 49.1
IPR007527Zinc finger, SWIM-typePROSITEPS50966ZF_SWIMcoord: 164..200
score: 8.803
IPR011335Restriction endonuclease type II-likeSUPERFAMILY52980Restriction endonuclease-likecoord: 364..592

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00061739-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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