TCONS_00061926-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00061926-protein
Unique NameTCONS_00061926-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length444

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00061926-protein ID=TCONS_00061926-protein|Name=TCONS_00061926-protein|organism=Clytia hemisphaerica|type=polypeptide|length=444bp
MDVADAAVGVPKVKDELAERCQKLFQDFLEEFTVDGEVKYLSEAQELIRP
ERNTLTVDFRDVETYKSELATTIQEEYYRVYPFLCRAVRNYARDRGEVPL
TKEFYVSFISLPTRHKIRELSTQKIGSLLRISGQVVRTHPVHPELVSGTF
KCLDCQTIIKEVDQQFKYTQPSICRNQVCQNRQRFELDIDKSRFVDFQKV
RIQETQAELPRGCIPRSVEIVLRAEAVEKAQAGDKCDFTGSLIVVPDVAQ
INMPGSRAETRGRNKQGAGDVEGVRGLKSLGVRDLTYRLAFLACSVTATN
PRFGGKDLSAEDMTAEAIKSQMTEQEWHKIYEMSQDKNLYHHLITSMFPT
IHGNDEVKRGVLLMLFGGVPKTTGEGTTLRGDINVCIVGDPSXRQRAKGQ
HFVVISMSVLLVTPVLLKVNSSSKSNNFLHARCTRQEKQVLLQV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038828XLOC_038828Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00061926TCONS_00061926Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008049MCM6
IPR031327MCM
IPR027925MCM_N
IPR033762MCM_OB
IPR001208MCM_dom
IPR012340NA-bd_OB-fold
Vocabulary: Biological Process
TermDefinition
GO:0006270DNA replication initiation
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003677DNA binding
GO:0003678DNA helicase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0042555MCM complex
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006270 DNA replication initiation
cellular_component GO:0042555 MCM complex
cellular_component GO:0005634 nucleus
molecular_function GO:0005524 ATP binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0003678 DNA helicase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008049DNA replication licensing factor Mcm6PRINTSPR01662MCMPROTEIN6coord: 114..126
score: 64.96
coord: 164..181
score: 70.99
coord: 77..89
score: 67.52
coord: 217..228
score: 62.96
coord: 273..294
score: 77.78
IPR031327Mini-chromosome maintenance proteinSMARTSM00350mcmcoord: 113..442
e-value: 4.5E-23
score: 37.0
IPR027925MCM N-terminal domainPFAMPF14551MCM_Ncoord: 22..108
e-value: 5.2E-18
score: 65.5
NoneNo IPR availableGENE3D3.30.1640.10coord: 12..113
e-value: 3.3E-21
score: 75.1
NoneNo IPR availableGENE3D2.40.50.140coord: 114..299
e-value: 1.2E-42
score: 144.8
IPR033762MCM OB domainPFAMPF17207MCM_OBcoord: 116..245
e-value: 4.1E-35
score: 120.3
IPR001208MCM domainPFAMPF00493MCMcoord: 327..393
e-value: 4.0E-20
score: 72.1
IPR001208MCM domainPROSITEPS50051MCM_2coord: 339..392
score: 21.356
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 24..247

Blast
[Close]
BLAST of TCONS_00061926-protein vs. Swiss-Prot (Human)
Match: MCM6 (DNA replication licensing factor MCM6 OS=Homo sapiens GN=MCM6 PE=1 SV=1)

HSP 1 Score: 610.912 bits (1574), Expect = 0.000e+0
Identity = 288/399 (72.18%), Postives = 343/399 (85.96%), Query Frame = 0 
Query:    1 MDVADAA---VGVP--KVKDELAERCQKLFQDFLEEF-TVDGEVKYLSEAQELIRPERNTLTVDFRDVETYKSELATTIQEEYYRVYPFLCRAVRNYARDRGEVPLTKEFYVSFISLPTRHKIRELSTQKIGSLLRISGQVVRTHPVHPELVSGTFKCLDCQTIIKEVDQQFKYTQPSICRNQVCQNRQRFELDIDKSRFVDFQKVRIQETQAELPRGCIPRSVEIVLRAEAVEKAQAGDKCDFTGSLIVVPDVAQINMPGSRAETRGRNKQGAG-DVEGVRGLKSLGVRDLTYRLAFLACSVTATNPRFGGKDLSAEDMTAEAIKSQMTEQEWHKIYEMSQDKNLYHHLITSMFPTIHGNDEVKRGVLLMLFGGVPKTTGEGTTLRGDINVCIVGDPS 392
            MD+A AA    G    +V+DE+AE+CQKLF DFLEEF + DGE+KYL  A+ELIRPERNTL V F D+E +  +L+TTIQEE+YRVYP+LCRA++ + +DR E+PL K+FYV+F  LPTRHKIREL++ +IG L RISGQVVRTHPVHPELVSGTF CLDCQT+I++V+QQFKYTQP+ICRN VC NR+RF LD +KSRFVDFQKVRIQETQAELPRG IPRS+E++LRAEAVE AQAGDKCDFTG+LIVVPDV++++ PG+RAET  R     G + EG+RGL++LGVRDL+YRL FLAC V  TNPRFGGK+L  E+ TAE+IK+QMT +EW K++EMSQDKNLYH+L TS+FPTIHGNDEVKRGVLLMLFGGVPKTTGEGT+LRGDINVCIVGDPS
Sbjct:    1 MDLAAAAEPGAGSQHLEVRDEVAEKCQKLFLDFLEEFQSSDGEIKYLQLAEELIRPERNTLVVSFVDLEQFNQQLSTTIQEEFYRVYPYLCRALKTFVKDRKEIPLAKDFYVAFQDLPTRHKIRELTSSRIGLLTRISGQVVRTHPVHPELVSGTFLCLDCQTVIRDVEQQFKYTQPNICRNPVCANRRRFLLDTNKSRFVDFQKVRIQETQAELPRGSIPRSLEVILRAEAVESAQAGDKCDFTGTLIVVPDVSKLSTPGARAETNSRVSGVDGYETEGIRGLRALGVRDLSYRLVFLACCVAPTNPRFGGKELRDEEQTAESIKNQMTVKEWEKVFEMSQDKNLYHNLCTSLFPTIHGNDEVKRGVLLMLFGGVPKTTGEGTSLRGDINVCIVGDPS 399
The following BLAST results are available for this feature:
BLAST of TCONS_00061926-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MCM60.000e+072.18DNA replication licensing factor MCM6 OS=Homo sapi... [more]
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