TCONS_00061967-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00061967-protein
Unique Name	TCONS_00061967-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	631

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00061967-protein ID=TCONS_00061967-protein|Name=TCONS_00061967-protein|organism=Clytia hemisphaerica|type=polypeptide|length=631bp
MDKSIEHGGGRKKSFGRGFDFMMYNVDDIPPWYYTILLSLQHYMTMVGST
LVIPILLAGPLCIGDNPLALSEIISTVFLISGIATIVQSCVGTRLPIVQG
ATVAFLGPTISILNLPKYKCNNPSIVSVLSNSTGPLNTTINSLLVNSTIL
PFLFNSTIDPLLLNSIISNITLSNSTLLNTTMTSTTTTTKTPTTIFTTST
TTAAPLLMVEQHDWRVGMREIQGSIMLASLFQVVIGMTGIIGFLMRFIGP
LTIAPTVSLVGIALFESTGDFAGKQWGIAALTVLCVILFSQVLGHRFSFF
NLFPVILAIFTAWGVSAIITIAGGFPEDSPARTDKRISVVYEAEWIRVPY
PGQWGMPTAHVAGVFGMIAGVFASMIESIGDYYACARIAGVPPPPKHSVN
RGILCEGLCCILAGAFGSGNGTTSYSENIAAMGITRVASRRVVQVSGVIM
ILLSILGKFGAIFTLIPDPVIGGMLWSLFGFIIAVGLSNLQFVNLNSSRN
LFVLGFALFNGMVVPTWIVKNQEAINTGIEEIDQVLFVLLKTNMAVGGLT
AAIFDNLLPGSKEDRGLYAWKSMQGFDGSACRTYDLPYIQGFLDRHSWVK
YIPFLPHNKQRKISRSSELQNFDLQSDEIAI

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_038848	XLOC_038848	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00061967	TCONS_00061967	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006043	Xant/urac/vitC
IPR006042	Xan_ur_permease

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport
GO:0006810	transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0005215	transporter activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0006810	transport
cellular_component	GO:0016020	membrane
molecular_function	GO:0005215	transporter activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006043	Xanthine/uracil/vitamin C permease	PFAM	PF00860	Xan_ur_permease	coord: 35..123 e-value: 7.9E-13 score: 47.8 coord: 172..518 e-value: 5.8E-68 score: 229.3
IPR006042	Xanthine/uracil permease	PROSITE	PS01116	XANTH_URACIL_PERMASE	coord: 466..486

Blast

[Close]

BLAST of TCONS_00061967-protein vs. Swiss-Prot (Human)
Match: S23A1 (Solute carrier family 23 member 1 OS=Homo sapiens GN=SLC23A1 PE=1 SV=3)

HSP 1 Score: 419.853 bits (1078), Expect = 1.139e-139
Identity = 216/434 (49.77%), Postives = 292/434 (67.28%), Query Frame = 0

Query:  212 HDWRVGMREIQGSIMLASLFQVVIGMTGIIGFLMRFIGPLTIAPTVSLVGIALFESTGDFAGKQWGIAALTVLCVILFSQVLGH-----------------RFSFFNLFPVILAIFTAWGVSAIITIAGGFPEDSPA-----RTDKRISVVYEAEWIRVPYPGQWGMPTAHVAGVFGMIAGVFASMIESIGDYYACARIAGVPPPPKHSVNRGILCEGLCCILAGAFGSGNGTTSYSENIAAMGITRVASRRVVQVSGVIMILLSILGKFGAIFTLIPDPVIGGMLWSLFGFIIAVGLSNLQFVNLNSSRNLFVLGFALFNGMVVPTWIVKNQEAINTGIEEIDQVLFVLLKTNMAVGGLTAAIFDNLLPGSKEDRGLYAWKSMQGFD---GSACRTYDLPYIQGFLDRHSWVKYIPFLPHNKQRKISRSSELQ 620
            H W   +RE+QG+IM++S+ +VVIG+ G+ G L+ +IGPLT+ PTVSL+G+++F++ GD AG  WGI+A ++L +ILFSQ L +                 R   F +FP++LAI T W +  ++T+    P D  A     RTD R  ++  A WIR+PYP QWG+PT   A V GM +   A +IESIGDYYACAR+AG PPPP H++NRGI  EG+CCI+AG  G+GNG+TS S NI  +GIT+V SRRVVQ    IM++L  +GKF A+F+ +PDP++GGM  +LFG I AVGLSNLQFV++NSSRNLFVLGF++F G+ +P ++  N  AINTGI E+DQ+L VLL T M VGG  A I DN +PGS E+RGL  WK+    +    S+ ++YD P   G + R +++KYIP  P  K    S SS+ Q
Sbjct:  147 HIWHPRIREVQGAIMVSSVVEVVIGLLGLPGALLNYIGPLTVTPTVSLIGLSVFQAAGDRAGSHWGISACSILLIILFSQYLRNLTFLLPVYRWGKGLTLLRIQIFKMFPIMLAIMTVWLLCYVLTLTDVLPTDPKAYGFQARTDARGDIMAIAPWIRIPYPCQWGLPTVTAAAVLGMFSATLAGIIESIGDYYACARLAGAPPPPVHAINRGIFTEGICCIIAGLLGTGNGSTSSSPNIGVLGITKVGSRRVVQYGAAIMLVLGTIGKFTALFSSLPDPILGGMFCTLFGMITAVGLSNLQFVDMNSSRNLFVLGFSMFFGLTLPNYLESNPGAINTGILEVDQILIVLLTTEMFVGGCLAFILDNTVPGSPEERGLIQWKAGAHANSDMSSSLKSYDFPIGMGIVKRITFLKYIPICPVFK--GFSSSSKDQ 578

HSP 2 Score: 109.383 bits (272), Expect = 6.083e-25
Identity = 53/121 (43.80%), Postives = 77/121 (63.64%), Query Frame = 0

Query:   19 FDFMMYNVDDIPPWYYTILLSLQHYMTMVGSTLVIPILLAGPLCIGDNPLALSEIISTVFLISGIATIVQSCVGTRLPIVQGATVAFLGPTISILNLPKYKCNNPSIVSVLSNSTGPLNTT 139
            FD M+Y ++D+PPWY  ILL  QHY+T    T+ +P LLA  LC+G +   +S++I T+F   GI T++Q+ VG RLP+ Q +  AFL P  +IL L ++KC  P    +  N + PLNT+
Sbjct:   29 FD-MLYKIEDVPPWYLCILLGFQHYLTCFSGTIAVPFLLAEALCVGHDQHMVSQLIGTIFTCVGITTLIQTTVGIRLPLFQASAFAFLVPAKAILALERWKC--PPEEEIYGNWSLPLNTS 146

The following BLAST results are available for this feature:

BLAST of TCONS_00061967-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00061967-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
S23A1	1.139e-139	49.77	Solute carrier family 23 member 1 OS=Homo sapiens ...	[more]

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TCONS_00061967-protein (polypeptide) - C. hemisphaerica