TCONS_00062013-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062013-protein
Unique NameTCONS_00062013-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length423

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062013-protein ID=TCONS_00062013-protein|Name=TCONS_00062013-protein|organism=Clytia hemisphaerica|type=polypeptide|length=423bp
HRNKPLKSIFNSKMSFDKYKEKVEEGDTVVLYLGRNSALSFQIDVTKTHQ
TKYGAFPHKDLIGKAFGTKAYSMKGKGFAYLLHPTPELWTVTLPHRTQIL
YSTDISQITMELDLKPGSIVVESGTGSGSLSHSIVRTIKPNGHLHTFDFH
EKRVESAREEFEHHGISQYITSKCADACVDGFGLEDCADAVFLDLPKPWD
AIPHAKKALKKSGGRICSFSPCIEQVQRSCIVLRRLGFCEVKTVECLVRA
MNVRTTPMPEANTGAGFKWEKVEKTTSITSEDEPLSKMRKVSDAESGSDR
ITTSDTAKENSKSENDQQMDETNHKNETESKSNENVNANTNSNQESSENS
KNSPVNQQSSKVQSENVAGLLPNGMVAKLTAGTKPGNINVLTSKPGKQMP
GHTGYLTFASWYPSCSSEVKREE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038871XLOC_038871Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062013TCONS_00062013Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014816tRNA_MeTrfase_Gcd14
IPR029063SAM-dependent_MTases
Vocabulary: Cellular Component
TermDefinition
GO:0031515tRNA (m1A) methyltransferase complex
Vocabulary: Molecular Function
TermDefinition
GO:0016429tRNA (adenine-N1-)-methyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0030488tRNA methylation
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030488 tRNA methylation
cellular_component GO:0031515 tRNA (m1A) methyltransferase complex
molecular_function GO:0016429 tRNA (adenine-N1-)-methyltransferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014816tRNA (1-methyladenosine) methyltransferase catalytic subunit Gcd14PIRSFPIRSF017269GCD14coord: 16..422
e-value: 1.1E-82
score: 275.0
IPR014816tRNA (1-methyladenosine) methyltransferase catalytic subunit Gcd14PFAMPF08704GCD14coord: 77..298
e-value: 7.4E-93
score: 310.6
coord: 317..410
e-value: 1.8E-4
score: 21.2
IPR014816tRNA (1-methyladenosine) methyltransferase catalytic subunit Gcd14PROSITEPS51620SAM_TRM61coord: 26..412
score: 94.949
NoneNo IPR availableGENE3D3.40.50.150coord: 28..419
e-value: 5.7E-61
score: 205.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 275..364
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 384..405
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 22..254

Blast
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BLAST of TCONS_00062013-protein vs. Swiss-Prot (Human)
Match: TRM61 (tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A OS=Homo sapiens GN=TRMT61A PE=1 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 1.060e-101
Identity = 139/254 (54.72%), Postives = 182/254 (71.65%), Query Frame = 0 
Query:   14 MSFDKYKEKVEEGDTVVLYLGRNSALSFQIDVTKTHQTKYGAFPHK-DLIGKAFGTKAYSMKGKGFAYLLHPTPELWTVTLPHRTQILYSTDISQITMELDLKPGSIVVESGTGSGSLSHSIVRTIKPNGHLHTFDFHEKRVESAREEFEHHGISQYITSKCADACVDGFGLEDCADAVFLDLPKPWDAIPHAKKALKKSGGRICSFSPCIEQVQRSCIVLRRLGFCEVKTVECLVRAMNVRTTPMPEANTGAG 266
            MSF  Y+E ++EGDT +L LG  + ++ ++      QT++G   H  DLIG+ FG+K    +G G+ Y+LHPTPELWT+ LPHRTQILYSTDI+ ITM L+L+PGS+V ESGTGSGS+SH+I+RTI P GHLHT +FH++R E AREEF+ H + +++T +  D C  GFG+   ADAVFLD+P PW+A+ HA  ALK  GGR CSFSPCIEQVQR+C  L   GF E+ T+E L +  NVRT  +P  + G G
Sbjct:    1 MSFVAYEELIKEGDTAILSLGHGAMVAVRVQRGAQTQTRHGVLRHSVDLIGRPFGSKVTCGRG-GWVYVLHPTPELWTLNLPHRTQILYSTDIALITMMLELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHRVGRWVTVRTQDVCRSGFGVSHVADAVFLDIPSPWEAVGHAWDALKVEGGRFCSFSPCIEQVQRTCQALAARGFSELSTLEVLPQVYNVRTVSLPPPDLGTG 253
The following BLAST results are available for this feature:
BLAST of TCONS_00062013-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TRM611.060e-10154.72tRNA (adenine(58)-N(1))-methyltransferase catalyti... [more]
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