TCONS_00062055-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00062055-protein
Unique Name	TCONS_00062055-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	454

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00062055-protein ID=TCONS_00062055-protein|Name=TCONS_00062055-protein|organism=Clytia hemisphaerica|type=polypeptide|length=454bp
MNIIANWQDLNGNLLNLKIIHLSRNSIYIANVNGSCSWLHQFSFSVGXER
KWVVQLASSIFFLGWAMGSILLGWAADRYGRKTVLFPSLLACMVLSAISP
FLPSLSVFVVVRFLIGMCIPGTSLQMFIIMSEVVGERHRLKSGLIIWFAN
ALAVCLIGVKAYFIRDWKILYLVCTAPYVVTLLFYKMVPESPQWLILKKR
QSEALIIFKKIAKFNGKQLDDKFSIEEKKENGKTSKVRFMTADILHKTAI
QGFGWMVSGMLFFGLSLSVGQLGGSAHINFILVSLVEIPALFIAIFLGEK
IGRKRIVLIPLFIGGIACGLISLFQHEICVFPAGSISITLGKIILALIGK
LFVTITFDSFYTWSAELYPTELRGKGMGLCQVSSLLGATISPWLVNGFKL
LHVSSPFIVLCGFAVTSTIALTFLPETQNQIKKTLVIENLNTTGEKKKNI
DEKV

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_038890	XLOC_038890	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00062055	TCONS_00062055	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005828	MFS_sugar_transport-like
IPR005829	Sugar_transporter_CS
IPR020846	MFS_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0022857	transmembrane transporter activity
GO:0005215	transporter activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0022857	transmembrane transporter activity
molecular_function	GO:0005215	transporter activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1250.20		coord: 26..205 e-value: 4.4E-25 score: 87.6
None	No IPR available	GENE3D	1.20.1250.20		coord: 218..454 e-value: 1.6E-18 score: 66.2
IPR005828	Major facilitator, sugar transporter-like	PFAM	PF00083	Sugar_tr	coord: 53..430 e-value: 2.0E-29 score: 102.7
IPR005829	Sugar transporter, conserved site	PROSITE	PS00216	SUGAR_TRANSPORT_1	coord: 72..88
IPR020846	Major facilitator superfamily domain	PROSITE	PS50850	MFS	coord: 1..429 score: 22.416
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 51..425 e-value: 7.37251E-21 score: 90.8361
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 52..430

Blast

[Close]

BLAST of TCONS_00062055-protein vs. Swiss-Prot (Human)
Match: S22A3 (Solute carrier family 22 member 3 OS=Homo sapiens GN=SLC22A3 PE=1 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 7.465e-56
Identity = 132/417 (31.65%), Postives = 215/417 (51.56%), Query Frame = 0

Query:   52 WVVQLASSIFFLGWAMGSILLGWAADRYGRKTVLFPSLLACMVLSAISPFLPSLSVFVVVRFLIGMCIPGTSLQMFIIMSEVVGERHRLKSGLIIWFANALAVCLIGVKAYFIRDWKILYLVCTAPYVVTLLFYKMVPESPQWLILKKRQSEALIIFKKIAKFNGKQLDDKFSIEEKKENGKTSKVRFM----TADILHKTAIQGFGWMVSGMLFFGLSLSVGQLGGSAHINFILVSLVEIPALFIAIFLGEKIGRKRIVLIPLFIGGIACGLISLFQHEICVFPAGSISITLGKIILALIGKLFVTITFDSFYTWSAELYPTELRGKGMGLCQVSSLLGATISPWLVNGFKLLHVSSPFIV------LCGFAV-----TSTIALTFLPETQNQIKKTLVIENLNTTGEKKKNIDEK 453
            W++ L  +I  LG+  G+  LG+AADRYGR  +   S L   V   +  F P+  VFV+ RFL G+   GT +  ++I++E+VG + R   G++I     L + ++   AYFI +W+ + L  T P  + LL+Y +VPESP+WLI +K+  +AL I ++IAK NGK L   +S E    + + S   F+    T  +   T I  F W  S +++ GL + +G +GG+ +I+F +  +VE+P   + +   E++GR+        + G+AC L++ F  E          I   +  +A +G+L +T+ F+  Y  ++ELYPT LR  G+ LC      G  I+P+L+     + +  P I+      +CG  V     T  IA   LPET + ++K     +      KK  +   
Sbjct:  152 WMLDLTQAILNLGFLTGAFTLGYAADRYGRIVIYLLSCLGVGVTGVVVAFAPNFPVFVIFRFLQGVFGKGTWMTCYVIVTEIVGSKQRRIVGIVIQMFFTLGIIILPGIAYFIPNWQGIQLAITLPSFLFLLYYWVVPESPRWLITRKKGDKALQILRRIAKCNGKYLSSNYS-EITVTDEEVSNPSFLDLVRTPQMRKCTLILMFAWFTSAVVYQGLVMRLGIIGGNLYIDFFISGVVELPGALLILLTIERLGRRLPFAASNIVAGVAC-LVTAFLPE---------GIAWLRTTVATLGRLGITMAFEIVYLVNSELYPTTLRNFGVSLCSGLCDFGGIIAPFLLFRLAAVWLELPLIIFGILASICGGLVMLLPETKGIA---LPETVDDVEKLGSPHSCKCGRNKKTPVSRS 554

The following BLAST results are available for this feature:

BLAST of TCONS_00062055-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00062055-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
S22A3	7.465e-56	31.65	Solute carrier family 22 member 3 OS=Homo sapiens ...	[more]

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TCONS_00062055-protein (polypeptide) - C. hemisphaerica