TCONS_00062060-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062060-protein
Unique NameTCONS_00062060-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length207

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062060-protein ID=TCONS_00062060-protein|Name=TCONS_00062060-protein|organism=Clytia hemisphaerica|type=polypeptide|length=207bp
FIYLFRKLKKNCNKMDLNLNVLEGLKLVGDIVNVPDKPFESLVNLTYSCL
SNKEPIEPNEFNSLQGVDSSVAKQAFYGLNTLIVEAARKNIEEAEIRSLL
EECKWPNDRQDPLLDKIKVIRRELQMNLVRTDSSYPHIVDVDWRVDYCIK
SNQVEKLNDSSYMVSLKTQEPNNKEGNVEFFCSVDQLQDLVSKLKDASKT
LEKASQG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038894XLOC_038894Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062060TCONS_00062060Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017920COMM
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 184..207
NoneNo IPR availableCDDcd04751Commd3coord: 113..206
e-value: 9.57639E-24
score: 90.4856
IPR017920COMM domainPFAMPF07258COMM_domaincoord: 136..205
e-value: 2.4E-19
score: 69.1
IPR017920COMM domainPROSITEPS51269COMMcoord: 137..205
score: 14.302

Blast
[Close]
BLAST of TCONS_00062060-protein vs. Swiss-Prot (Human)
Match: COMD3 (COMM domain-containing protein 3 OS=Homo sapiens GN=COMMD3 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 3.327e-29
Identity = 61/194 (31.44%), Postives = 109/194 (56.19%), Query Frame = 0 
Query:   15 MDLNLNVLEGLKLVGDIVNVPDKPFESLVNLTYSCLSNKEPIEPN-EFNSLQGVDSSVAKQAFYGLNTLIVEAARKNIEEAEIRSLLEECKWPNDRQDPLLDKIKVIRRELQMNLVRTDSSYPHIVDVDWRVDYCIKSNQVEKLNDSSYMVSLKTQEPNNKE-GNVEFFCSVDQLQDLVSKLKDASKTLEKASQ 206
            M+L+ +V +G +++ D  +     F  L+   +  L + +  E   +   L+ +D  V K       T I+EA +   +++ + + LE+CK+  +R +    + +  +  L++ L     S PHI DV WR++Y IK+NQ+ ++   +Y+V+L  Q  ++     + F CS++QLQDLV KLKDASK+LE+A+Q
Sbjct:    1 MELSESVQKGFQMLADPRSFDSNAFTLLLRAAFQSLLDAQADEAVLDHPDLKHIDPVVLKHCHAAAATYILEAGKHRADKSTLSTYLEDCKFDRERIELFCTEYQNNKNSLEILLGSIGRSLPHITDVSWRLEYQIKTNQLHRMYRPAYLVTLSVQNTDSPSYPEISFSCSMEQLQDLVGKLKDASKSLERATQ 194
The following BLAST results are available for this feature:
BLAST of TCONS_00062060-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
COMD33.327e-2931.44COMM domain-containing protein 3 OS=Homo sapiens G... [more]
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