TCONS_00062164-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062164-protein
Unique NameTCONS_00062164-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length735

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062164-protein ID=TCONS_00062164-protein|Name=TCONS_00062164-protein|organism=Clytia hemisphaerica|type=polypeptide|length=735bp
MAMSKFLHFGKLFSELAAQSTKVATGSRQRALHSLRKLYSSEPPKGFEKF
FPKSTGKKPSGSSNSGGSGGGKKGKEWWQEEENKRLLIMTASGLLAMYLL
SGSSSSMREINWQDFRINYLERGEVDHVVITNKSLAKVYLKSDPANCHIF
FNIGSVDSFEKNLYQTQEDLGIDPAFYIPVTYSKEVEWLSELIKTAPLLL
ILGGLFYFSRKLPGMSGSKGPGGMFGVGQSTAKFFNKETGIKTKFRDVAG
CEEAKVEIMEFVNFLKHPEKYLELGAKIPKGAIISGPPGTGKTLLAKATA
GEAQVPFLSVSGSEFLEMFVGVGPARVRDMFAQARKQAPCIIFIDEIDAV
GRARGKSGNFGGGYDERENTLNQLLVEMDGFSSTSNVVVLAGTNRPDVLD
PALMRPGRFDRQIHLPPPDIKGRVSIFKVHLRPLKYELDENEVARKLSAL
TPGFTGADIANVCNEAALIAARHLSKLVEMKHFEAAIERVIGGLEKKTQV
LQPEEKKTVAYHEAGHAVAGWFLENADPLLKVSIIPRGRGLGYAQYLPKE
QYLYSTEQLFDRMCMTLGGRVAEEIFFGRITTGAQDDLNKITKSAYAQVV
TYGMNDKVGQISFDLPREGEMAMDKPYSQATAQMIDEEVRSLVDVAYKST
HDLLTKHKEDIEKVAQLLLEKEVLNRQDMIDLLGPRPFAEKSTYEDFVAG
TGSEEEDTTMPEGLKQLAEEMKKNDDGGDDKPLAA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038978XLOC_038978Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062164TCONS_00062164Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR005936FtsH
IPR000642Peptidase_M41
IPR011546Pept_M41_FtsH_extracell
IPR003959ATPase_AAA_core
IPR003960ATPase_AAA_CS
IPR027417P-loop_NTPase
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004222metalloendopeptidase activity
GO:0005524ATP binding
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0005524 ATP binding
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 278..419
e-value: 1.8E-21
score: 87.3
IPR005936Peptidase, FtsHTIGRFAMTIGR01241TIGR01241coord: 188..683
e-value: 1.1E-205
score: 682.0
IPR005936Peptidase, FtsHHAMAPMF_01458FtsHcoord: 5..707
score: 32.79
IPR000642Peptidase M41PFAMPF01434Peptidase_M41coord: 480..681
e-value: 2.0E-76
score: 256.3
IPR011546Peptidase M41, FtsH extracellularPFAMPF06480FtsH_extcoord: 88..175
e-value: 5.5E-11
score: 42.7
NoneNo IPR availableGENE3D1.10.8.60coord: 434..507
e-value: 8.1E-22
score: 76.6
NoneNo IPR availableGENE3D3.40.50.300coord: 227..433
e-value: 1.4E-55
score: 187.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 698..735
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..76
NoneNo IPR availableCDDcd00009AAAcoord: 279..417
e-value: 2.10364E-25
score: 102.224
NoneNo IPR availableSUPERFAMILY140990FtsH protease domain-likecoord: 500..691
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 283..416
e-value: 4.5E-42
score: 143.5
IPR003960ATPase, AAA-type, conserved sitePROSITEPS00674AAAcoord: 387..405
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 243..513

Blast
[Close]
BLAST of TCONS_00062164-protein vs. Swiss-Prot (Human)
Match: AFG32 (AFG3-like protein 2 OS=Homo sapiens GN=AFG3L2 PE=1 SV=2)

HSP 1 Score: 890.952 bits (2301), Expect = 0.000e+0
Identity = 467/741 (63.02%), Postives = 565/741 (76.25%), Query Frame = 0 
Query:   21 TKVATGSRQRALHSLRKLY---SSEPPKGFEKFFPK-STGKK---------------PSGSSNSGGSGGG------------------KKGKEWWQEEENKRLLIMTA--SGLLAMYLLSGSSSSMREINWQDFRINYLERGEVDHVVITNKSLAKVYL---KSDPANCHIFFNIGSVDSFEKNLYQTQEDLGIDPAFYIPVTYSKEVEWLSELIKTAPLLLILGGLFYFSRKLPGMSG--SKGPGGMFGVGQSTAKFFNKETGIKTKFRDVAGCEEAKVEIMEFVNFLKHPEKYLELGAKIPKGAIISGPPGTGKTLLAKATAGEAQVPFLSVSGSEFLEMFVGVGPARVRDMFAQARKQAPCIIFIDEIDAVGRARGKSGNFGGGYDERENTLNQLLVEMDGFSSTSNVVVLAGTNRPDVLDPALMRPGRFDRQIHLPPPDIKGRVSIFKVHLRPLKYE--LDENEVARKLSALTPGFTGADIANVCNEAALIAARHLSKLVEMKHFEAAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWFLENADPLLKVSIIPRGRGLGYAQYLPKEQYLYSTEQLFDRMCMTLGGRVAEEIFFGRITTGAQDDLNKITKSAYAQVVTYGMNDKVGQISFDLPREGEMAMDKPYSQATAQMIDEEVRSLVDVAYKSTHDLLTKHKEDIEKVAQLLLEKEVLNRQDMIDLLGPRPFAEKSTYEDFVAGTGSEEEDTTMPEGLK 715
            T  A  SR   L  +   Y    S PPKGFEK+FP    GKK               P+ ++ S G GGG                  +KG   W +++ +   + TA   G +  YLL   S   REI W+DF  NYL +G VD + + NK   +V     K+     +++FNIGSVD+FE+NL   Q++LGI+    +PV Y  E +  S L+   P +LI+  L Y  R+ P   G   +G GG+F VG++TAK    E  I  KF+DVAGCEEAK+EIMEFVNFLK+P++Y +LGAKIPKGAI++GPPGTGKTLLAKATAGEA VPF++VSGSEFLEMFVGVGPARVRD+FA ARK APCI+FIDEIDAVGR RG+ GNFGG   E+ENTLNQLLVEMDGF++T+NVV+LAGTNRPD+LDPAL+RPGRFDRQI + PPDIKGR SIFKVHLRPLK +  L+++++ARKL++LTPGF+GAD+ANVCNEAALIAARHLS  +  KHFE AIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGW+LE+ADPLLKVSIIPRG+GLGYAQYLPKEQYLY+ EQL DRMCMTLGGRV+EEIFFGRITTGAQDDL K+T+SAYAQ+V +GMN+KVGQISFDLPR+G+M ++KPYS+ATA++ID+EVR L++ AYK T  LLT+ K D+EKVA LLLEKEVL++ DM++LLGPRPFAEKSTYE+FV GTGS +EDT++PEGLK
Sbjct:   44 TTQARASRNSLLTDIIAAYQRFCSRPPKGFEKYFPNGKNGKKASEPKEVMGEKKESKPAATTRSSGGGGGGGGKRGGKKDDSHWWSRFQKGDIPWDDKDFRMFFLWTALFWGGVMFYLLLKRSG--REITWKDFVNNYLSKGVVDRLEVVNKRFVRVTFTPGKTPVDGQYVWFNIGSVDTFERNLETLQQELGIEGENRVPVVYIAESDG-SFLLSMLPTVLIIAFLLYTIRRGPAGIGRTGRGMGGLFSVGETTAKVLKDE--IDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGR-GNFGG-QSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGKGLGYAQYLPKEQYLYTKEQLLDRMCMTLGGRVSEEIFFGRITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVLEKPYSEATARLIDDEVRILINDAYKRTVALLTEKKADVEKVALLLLEKEVLDKNDMVELLGPRPFAEKSTYEEFVEGTGSLDEDTSLPEGLK 777
The following BLAST results are available for this feature:
BLAST of TCONS_00062164-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AFG320.000e+063.02AFG3-like protein 2 OS=Homo sapiens GN=AFG3L2 PE=1... [more]
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