TCONS_00062255-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062255-protein
Unique NameTCONS_00062255-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length283

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062255-protein ID=TCONS_00062255-protein|Name=TCONS_00062255-protein|organism=Clytia hemisphaerica|type=polypeptide|length=283bp
MFHLNQEHGINIQLTDNCTVATRTESFSNALVFSQRPLQEGEVFMIEITD
SKDGWSGNLRCGITLHNPEEITIPQYLLPDLSRLGKSCVFSIRPSTSDPF
NNLEATNQNNQNSSINNEVHLKYFDSVGRSEKATHSIHPKLLVNHNFKDL
KPCDTGSRIGFFISPGRELFFIINGIQYGPCAGQIPINGPVYAALDLYGM
TSQIKIVNCNVPSLLTSGMQAARVSFDRKCITEQNLPRDLKRDLLNTYKT
PATQSTQTETASEENEQITEVQQDPHSTSVIFF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039019XLOC_039019Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062255TCONS_00062255Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006573NHR_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006573Neuralized homology repeat (NHR) domainSMARTSM0058827bcoord: 2..116
e-value: 1.5E-10
score: 51.1
IPR006573Neuralized homology repeat (NHR) domainPFAMPF07177Neuralizedcoord: 2..208
e-value: 2.6E-36
score: 124.8
IPR006573Neuralized homology repeat (NHR) domainPROSITEPS51065NHRcoord: 1..209
score: 29.887
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 248..283
NoneNo IPR availableCDDcd12887SPRY_NHR_likecoord: 2..207
e-value: 4.23087E-39
score: 134.938

Blast
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BLAST of TCONS_00062255-protein vs. Swiss-Prot (Human)
Match: NEUL2 (Neuralized-like protein 2 OS=Homo sapiens GN=NEURL2 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.722e-29
Identity = 82/259 (31.66%), Postives = 127/259 (49.03%), Query Frame = 0 
Query:    2 FHLNQEHGINIQLTDNCTVATRTESFSNALVFSQRPLQEGEVFMIEITDSKDGWSGNLRCGITLHNPEEIT-IPQYLLPDLSRLGKSCVFSIR------PSTSDPFNNLEATNQNNQNSSINNEVHLKYF-----DSVGRSEKATHSIHPKLLVNHNFKDLKPCDTGSRIGFFISP----GRELFFIINGIQYGPCAGQIPINGPVYAALDLYGMTSQIKIVNC--NVPSLLT-SGMQAARVSFDRKCITEQNLPRDLK 241
            FH  + HG NI++  + T ATR ESF++ + FS+ PL  G+VF++EI + + GW G+LR G+T  +P  +  +P++ LPDL  LG + VF+I       P    P     A ++      +   + ++ F       VGRS    +S     L   N   L P    SR+G    P      ++  IING   GP A  +P   P+YA +D++  T  +++V     +PSL T   +   R    R  I   +LP++LK
Sbjct:   26 FH--RVHGANIRVDPSGTRATRVESFAHGVCFSREPLAPGQVFLVEIEEKELGWCGHLRLGLTALDPASLAPVPEFSLPDLVNLGHTWVFAITRHHNRVPREGRPEAEAAAPSR-PPTLLVEPYLRIEQFRIPRDRLVGRSRPGLYSHLLDQLYELNV--LPPTARRSRLGVLFCPRPDGTADMHIIINGEDMGPSARGLPAAQPLYAVVDVFASTKSVRLVQLEYGLPSLQTLCRLVIQRSMVHRLAIDGLHLPKELK 279
The following BLAST results are available for this feature:
BLAST of TCONS_00062255-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NEUL24.722e-2931.66Neuralized-like protein 2 OS=Homo sapiens GN=NEURL... [more]
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