TCONS_00062350-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062350-protein
Unique NameTCONS_00062350-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length477

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062350-protein ID=TCONS_00062350-protein|Name=TCONS_00062350-protein|organism=Clytia hemisphaerica|type=polypeptide|length=477bp
ELHNRRNNVFFDSCCQTFMFNLLVILDLQQHQTVCFEECYKKDDNNQSNM
NCNASLAQKKSRLLHLPNHKKPSNKKDNISRLLGNINNYPPLNNPRYVIQ
NGRHPTIIWWTNSFYPHDEKDTILQCPRGPCHVTSNREYYWSNTTRAFVF
YGTSFRANDLPLPRLPHHEWALIHEESPKNNWILSDSLGIRFQKKEGLGI
AVYVQRDCEPPSDRDAYVRELMKHIKIDSYGPCVNNKKMPREINGFVKLS
SEKYYHFLAKYKFQIAFENCRCKDYMTEKVFRPLCIGSVPVYLGSKEARD
LMPSNKSIIMVDDFESPKDLANFLIAVNANDTLYEEYLQHRKTKTTTNPK
LLNILKNQPWKLLHKNYKTNFGHYMFSGYTCHVCDQLHLRNQNLKQHLKD
RNKHPIMPPRVADQSHLGCPLPVRTIQRPNEDHYYKQTVYNYGNDEAQAL
VQMLQANETDTKTFERKYLKRKTDRYP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039068XLOC_039068Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062350TCONS_00062350Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031481Glyco_tran_10_N
IPR001503Glyco_trans_10
Vocabulary: Molecular Function
TermDefinition
GO:0008417fucosyltransferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006486protein glycosylation
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006486 protein glycosylation
cellular_component GO:0016020 membrane
molecular_function GO:0008417 fucosyltransferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031481Fucosyltransferase, N-terminalPFAMPF17039Glyco_tran_10_Ncoord: 104..181
e-value: 1.6E-7
score: 31.7
IPR001503Glycosyl transferase family 10PFAMPF00852Glyco_transf_10coord: 201..396
e-value: 3.2E-35
score: 121.3
NoneNo IPR availableSUPERFAMILY53756UDP-Glycosyltransferase/glycogen phosphorylasecoord: 92..389

Blast
[Close]
BLAST of TCONS_00062350-protein vs. Swiss-Prot (Human)
Match: FUT11 (Alpha-(1,3)-fucosyltransferase 11 OS=Homo sapiens GN=FUT11 PE=1 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 3.782e-87
Identity = 150/416 (36.06%), Postives = 218/416 (52.40%), Query Frame = 0 
Query:  100 QNGRHPTIIWWTNSFYPHDEKDTI-LQCPRGPCHVTSNREYYWSNTTRAFVFYGTSFRANDLPLPRLPHHEWALIHEESPKNNWILSDSLGIRF--------------------------------------QKKEGLGIAVYVQRDCEPPSDRDAYVRELMKHIKIDSYGPCVNNKKMPR---EINGFVKLSSEKYYHFLAKYKFQIAFENCRCKDYMTEKVFRPLCIGSVPVYLGSKEARDLMPSNKSIIMVDDFESPKDLANFLIAVNANDTLYEEYLQHRKTKTTTNPKLLNILKNQPWKL---LHKNYKTNFGHYMFSGYTCHVCDQLHLRNQNLKQHLKDRNKHPIMPPRVADQSHLGCPLPVRTI----QRPNEDHYYKQTVYNY--GNDEAQALVQMLQANETDTKTF 464
            + G  P ++WW+   +PH   D+  ++C RG C  + NR     + TRA +FYGT FRA+  PLPRL H  WAL+HEESP NN++LS   GIR                                        ++ G    +Y+Q  C+ P+DRD YVRELM+HI +DSYG C+ N+++P    +          +   FL++YKF +A EN  C DYMTEK++RP+ +G+VPVY GS   RD MP+N S+I++DDFESP+ LA F+  ++ ND  Y +YL +++    TN  LL+ LK++ W +   L  NY         +G+ C VCD    R    K H       P+  P +A  SH+ CP+P        + P  D + +  + +Y  G D+ +AL  M+  NET+   F
Sbjct:   71 EAGDLPVLLWWSPGLFPHFPGDSERIECARGACVASRNRRALRDSRTRALLFYGTDFRASAAPLPRLAHQSWALLHEESPLNNFLLSHGPGIRLFNLTSTFSRHSDYPLSLQWLPGTAYLRRPVPPPMERAEWRRRGYAPLLYLQSHCDVPADRDRYVRELMRHIPVDSYGKCLQNRELPTARLQDTATATTEDPELLAFLSRYKFHLALENAICNDYMTEKLWRPMHLGAVPVYRGSPSVRDWMPNNHSVILIDDFESPQKLAEFIDFLDKNDEEYMKYLAYKQPGGITNQFLLDSLKHREWGVNDPLLPNY--------LNGFECFVCDYELARLDAEKAHAASPGDSPVFEPHIAQPSHMDCPVPTPGFGNVEEIPENDSWKEMWLQDYWQGLDQGEALTAMIHNNETEQTKF 478
The following BLAST results are available for this feature:
BLAST of TCONS_00062350-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FUT113.782e-8736.06Alpha-(1,3)-fucosyltransferase 11 OS=Homo sapiens ... [more]
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