TCONS_00062363-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062363-protein
Unique NameTCONS_00062363-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length559

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062363-protein ID=TCONS_00062363-protein|Name=TCONS_00062363-protein|organism=Clytia hemisphaerica|type=polypeptide|length=559bp
MFVMGCPNLIIAVDHESLVPIFNKRELFELKNPRLLDIREKTLMYNFQVI
HIPGKKNVGANFMSRIPLSPPSNTSDKIEAAISASIHLRFNQSNSCSLED
ISRKASEDPEYIDLHRTILEGFPTNKETLPQHILPYWKLKNDLYCVDNLI
MLDDRVLIPRALRRTLLEELHIGHQGVSAMRENAKRRFFWPQMSSHIQNH
RNQCTRCNQIAPSNRKDTPEVPDPPIYPFQQTVADLFHMAGRLYIVYADR
FSGWPEVASTKPDATATTVINILRRYFTNFGVPEELSSDGGPPFTSHEFE
NFLRSWNVSHRISSVGYPQSNGRAEAAVKTVKRILTTNISQSGSLDTDNV
AKALLLYRNTPSPDMGVSPSELLFGRNIRDHLPAPRRFRKEWIDLADIRE
NTFTRRHQQACTKSQRHLPDLKVGDTVSIQNQTGNTPLRWEKTGVISESL
PHRQYRVVVDGSRRTTLRNRQFLRPIPNETRNDIIDLDILRQTKEEHLPK
TNGTDLPALNQPETIPTEQETTQADTSPSIVCPPTPVIQTRRSTRTRRPP
ERFKDYVMK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039077XLOC_039077Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062363TCONS_00062363Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001584Integrase_cat-core
IPR012337RNaseH-like_dom
Vocabulary: Biological Process
TermDefinition
GO:0015074DNA integration
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 230..333
e-value: 4.3E-16
score: 59.1
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 224..377
score: 21.085
IPR012337Ribonuclease H-like domainGENE3D3.30.420.10coord: 223..421
e-value: 2.2E-31
score: 108.5
IPR012337Ribonuclease H-like domainSUPERFAMILY53098Ribonuclease H-likecoord: 227..379
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 517..559

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062363-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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