TCONS_00062392-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062392-protein
Unique NameTCONS_00062392-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length490

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062392-protein ID=TCONS_00062392-protein|Name=TCONS_00062392-protein|organism=Clytia hemisphaerica|type=polypeptide|length=490bp
MVTFMLFLMIVKVGVFCRPAINKRNFTSAFDQIQWNNEHILNSEDSEDLF
EDDIVKSPAIDEIINRKITSPGRQRRDVITGPYAWPNGKVPYVFADDYPE
FSKFWVRSSMDEIQKVSCVQFIERTDEKDYIKIVNGTQCYSSIGRRGSNQ
TLSLGDNCLSDSIIQHELLHALGFFHEQSRLERDYFVTVHWDNIIKGKEH
NFEKYGLGEASHLDEHYDTKSLMHYSNYIFAINESKMTISSKSNASESLG
GFEMTDTDVRQLNKFYSCPCADHMFGCEFITSMCGQFRTQQYCQKSCGFC
HTSENPPMSSTVSSLTTTMSNNTTTSYTTGKSLPTTKVIPTATTTIQTKT
TITTIVSSTRAVITQTTSPETTTTISTPTTAVQSTATALPTTTSTTRGVG
NNTCLDINPCCTDLATHGLCNKSEYIRSICNKSCNKECSGSNSTELLATT
RSSFFGDEPPTPSKAITLFAPFSSSFLSLLVNVLWRFGYT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039094XLOC_039094Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062392TCONS_00062392Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001506Peptidase_M12A
IPR003582ShKT_dom
IPR006026Peptidase_Metallo
IPR024079MetalloPept_cat_dom
IPR034035Astacin-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004222metalloendopeptidase activity
GO:0008237metallopeptidase activity
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0008237 metallopeptidase activity
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001506Peptidase M12APRINTSPR00480ASTACINcoord: 106..124
score: 27.54
coord: 158..176
score: 52.37
coord: 254..267
score: 30.6
coord: 177..194
score: 43.06
coord: 216..231
score: 43.33
IPR001506Peptidase M12APFAMPF01400Astacincoord: 84..269
e-value: 2.3E-55
score: 187.1
IPR003582ShKT domainSMARTSM00254ShkT_1coord: 403..439
e-value: 1.6
score: 17.7
coord: 269..301
e-value: 6.8E-4
score: 28.9
IPR003582ShKT domainPFAMPF01549ShKcoord: 403..435
e-value: 0.23
score: 11.9
coord: 269..300
e-value: 0.0088
score: 16.5
IPR003582ShKT domainPROSITEPS51670SHKTcoord: 270..300
score: 7.079
IPR003582ShKT domainPROSITEPS51670SHKTcoord: 404..438
score: 9.647
IPR006026Peptidase, metallopeptidaseSMARTSM00235col_5coord: 81..221
e-value: 3.4E-36
score: 136.2
IPR024079Metallopeptidase, catalytic domainGENE3D3.40.390.10coord: 78..270
e-value: 1.2E-50
score: 171.7
IPR034035Astacin-like metallopeptidase domainCDDcd04280ZnMc_astacin_likecoord: 87..266
e-value: 4.65187E-72
score: 227.454
NoneNo IPR availableSUPERFAMILY55486Metalloproteases ("zincins"), catalytic domaincoord: 81..270

Blast
[Close]
BLAST of TCONS_00062392-protein vs. Swiss-Prot (Human)
Match: MEP1B (Meprin A subunit beta OS=Homo sapiens GN=MEP1B PE=1 SV=3)

HSP 1 Score: 144.436 bits (363), Expect = 5.716e-37
Identity = 87/247 (35.22%), Postives = 134/247 (54.25%), Query Frame = 0 
Query:   48 DLFEDDIVKSPAIDEIINRKITSPGRQRRDVITGPYAWPNGKVPYVFADDYPEFSKFWVRSSMDEIQKVSCVQFIERTDEKDYIKIVNGTQCYSSIG-RRGSNQTLSLGDNCLSDSIIQHELLHALGFFHEQSRLERDYFVTVHWDNIIKGKEHNFEKYGLGEASHLDEHYDTKSLMHYSNYIFAINESKMTISSKSNASESLGGFEM--TDTDVRQLNKFYSCPCA-DHMFGCEF-ITSMCGQFRT 289
            DLFE DI    A             + R  +I   Y WP+  +PYV  D     +K  + ++ +  +  +C+ F     E +YI +  G+ C+SS+G RR   Q LS+G NC   + +QHE LHALGF+HEQSR +RD +V + WD I+ G+EHNF  Y    +  L+  YD  S+MHYS   F  N ++ TI ++ +  E + G  M  +D+D+ +LN+ Y+C  +   M  C F + ++CG  ++
Sbjct:   47 DLFEGDIRLDRA-------------QIRNSIIGEKYRWPH-TIPYVLEDSLEMNAKGVILNAFERYRLKTCIDFKPWAGETNYISVFKGSGCWSSVGNRRVGKQELSIGANCDRIATVQHEFLHALGFWHEQSRSDRDDYVRIMWDRILSGREHNFNTYSDDISDSLNVPYDYTSVMHYSKTAFQ-NGTEPTIVTRISDFEDVIGQRMDFSDSDLLKLNQLYNCSSSLSFMDSCSFELENVCGMIQS 278
The following BLAST results are available for this feature:
BLAST of TCONS_00062392-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MEP1B5.716e-3735.22Meprin A subunit beta OS=Homo sapiens GN=MEP1B PE=... [more]
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