TCONS_00062436-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00062436-protein
Unique Name	TCONS_00062436-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	506

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00062436-protein ID=TCONS_00062436-protein|Name=TCONS_00062436-protein|organism=Clytia hemisphaerica|type=polypeptide|length=506bp
MLVTDTGLLFVITFWICLFFINLLLKSSQRYGFLYTETLVSFGVTFSLCQ
IRWQTSLFNKLFSKIGRYNPKLSLLWFTLGAVFAVISMVSSVVILTLMLY
RSVKDTKADKLLQPVMPGMNLPWNQVAYYLTTLIISGTFHEVGHAIAAVR
ENVRVLSFGVFVLFMYPGAFVELHTDQLDIITPFRRLRIFSAGVWHNFIL
AVVAYILSTSLPMWLSPLYTMGDGVLVTHVAQQSSIVNRLPVGDVITYIN
NCPVRKTEDWYLCLQKIQTNPVDGYCGPSSYTKTHNMSLPTLVENFGEPD
CCNDTSAYRFCFWYKRHPKAMSLSQKLFNANILVRTSLEYNSKFTEHACL
PARHILSGKMCKTNLDCALKNATEFSLCHIPLTKNTTRVIRIGHKKGQEV
LFVGEPRELSSTIMLSDYIPIYNTPLLNLPKHIESMCLYLISISAALALL
NMVPCFYLDGHHTLEILLEILLPHQHKLRLQIQTVILMLGSSLLLVNVLI
ALSTLF

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_039107	XLOC_039107	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00062436	TCONS_00062436	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001193	MBTPS2
IPR008915	Peptidase_M50
IPR001478	PDZ

Vocabulary: **Molecular Function**
Term	Definition
GO:0004222	metalloendopeptidase activity
GO:0005515	protein binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0016020	membrane
molecular_function	GO:0004222	metalloendopeptidase activity
molecular_function	GO:0005515	protein binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001193	Membrane-bound transcription factor site-2 protease	PRINTS	PR01000	SREBPS2PTASE	coord: 169..181 score: 35.58 coord: 114..133 score: 28.12 coord: 137..151 score: 45.83 coord: 153..168 score: 38.28
None	No IPR available	GENE3D	2.30.42.10		coord: 172..343 e-value: 4.9E-4 score: 19.5
IPR008915	Peptidase M50	PFAM	PF02163	Peptidase_M50	coord: 130..495 e-value: 1.6E-23 score: 83.2
IPR001478	PDZ domain	SUPERFAMILY	50156	PDZ domain-like	coord: 222..268

Blast

[Close]

BLAST of TCONS_00062436-protein vs. Swiss-Prot (Human)
Match: MBTP2 (Membrane-bound transcription factor site-2 protease OS=Homo sapiens GN=MBTPS2 PE=1 SV=1)

HSP 1 Score: 301.212 bits (770), Expect = 1.986e-96
Identity = 186/522 (35.63%), Postives = 278/522 (53.26%), Query Frame = 0

Query:   19 FFINLLLKSSQRYGFLYTETLVSFGVTFSLCQIRWQTSLFNKLFSKIGRYNPKLSLLWFTLGAVFAVISMVSSVVILTLMLYRSVKDTKAD--------------------------------KLLQPVMPGMNLPWNQVAYYLTTLIISGTFHEVGHAIAAVRENVRVLSFGVFVLFMYPGAFVELHTDQLDIITPFRRLRIFSAGVWHNFILAVVAYILSTSLPMWLSPLYTMGDGVLVTHVAQQSSIVN--RLPVGDVITYINNCPVRKTEDWYLCLQKIQTNPVDGYCGPSSYTKTHNMSLPTLVENFGEPDCCNDTSAYRFCFWYKRHPKAMSLSQKLFNANILVRTSLEYNSKFTEHACLPARHILSG-KMCKTNLDCALKNATEFSLCHIPLTKNTTRVIRIGHKKGQEVLFVGEPRELSSTIMLSDYIPIYNTPLLNLPKHIESMCLYLISISAALALLNMVPCFYLDGHHTLEILLEILLPH---QHKLRLQIQTVILMLGSSLLLVNVLIAL 502
            +  +L+LKSS  +   Y + L + G++ S   IRWQT++FN+ F   GR   ++   WF  G VF VI+M SS  +L   L +++    AD                                ++LQ V+PG+NLP NQ+ Y+ T ++ISG  HE+GH IAA+RE VR   FG+F+  +YPGAFV+L T  L +I+P ++LRIF AG+WHNF+LA++  +    LP+ L P Y  G GVL+T VA+ S  +    L VGD++T++ +CPV   +DW  CL  I   P  GYC  +S  +  +  +       G  +CCN+ S    CF Y+ +          FN  +              H CLPAR  +   ++C+TN DC   +++ F  C IP  +  TR+I++ H    ++L+VG P  L  T+ ++ +IP +N   ++LP  +E+   YLIS+S ALA++N VPCF LDG   L   L+  L      + ++  I   IL+ GS LL  NV + L
Sbjct:   18 YLTDLVLKSSVYFKHSYEDWLENNGLSISPFHIRWQTAVFNRAFYSWGRRKARMLYQWFNFGMVFGVIAMFSSFFLLGKTLMQTLAQMMADSPSSYSSSSSSSSSSSSSSSSSSSSSSSLHNEQVLQVVVPGINLPVNQLTYFFTAVLISGVVHEIGHGIAAIREQVRFNGFGIFLFIIYPGAFVDLFTTHLQLISPVQQLRIFCAGIWHNFVLALLGILALVLLPVILLPFYYTGVGVLITEVAEDSPAIGPRGLFVGDLVTHLQDCPVTNVQDWNECLDTIAYEPQIGYCISASTLQQLSFPVRAYKRLDGSTECCNNHSLTDVCFSYRNN----------FNKRL--------------HTCLPARKAVEATQVCRTNKDCKKSSSSSF--CIIPSLETHTRLIKVKHPPQIDMLYVGHPLHLHYTVSITSFIPRFNFLSIDLPVVVETFVKYLISLSGALAIVNAVPCFALDGQWILNSFLDATLTSVIGDNDVKDLIGFFILLGGSVLLAANVTLGL 513

The following BLAST results are available for this feature:

BLAST of TCONS_00062436-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00062436-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
MBTP2	1.986e-96	35.63	Membrane-bound transcription factor site-2 proteas...	[more]

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TCONS_00062436-protein (polypeptide) - C. hemisphaerica