TCONS_00062510-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062510-protein
Unique NameTCONS_00062510-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length314

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062510-protein ID=TCONS_00062510-protein|Name=TCONS_00062510-protein|organism=Clytia hemisphaerica|type=polypeptide|length=314bp
MGSSKSGWEKFFKEAGIPGKLVSDYANVFCDNRMRLDMLEELNKEVLQEL
GIKAVGDIIAILRYSKIKQKELSRNRSPSPDVEVITKKAVPKAATSSNKM
AAAGPRIPPKSSNLSMTVKASDSTSSSSSKSSSTKTNRKTLSQRFNEYEK
DAKQKKVENEEQKAEEKQTIKQTTSNSIKSNTTTVFTIQLPSKPPSTKTQ
PLAKNQPAVSKPQAQQTVRPQKVTLVPAQGKTLNRNKQSTSIFDRLDRLT
KGSQEASTTTTSSTSTSKQKTETTKKTVTVDPKQDVFSRLGTLQDDEAEE
SPPPKNVFSRLGGM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039171XLOC_039171Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062510TCONS_00062510Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013761SAM/pointed
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 138..170
NoneNo IPR availableGENE3D1.10.150.50coord: 4..75
e-value: 4.2E-8
score: 32.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..314
IPR013761Sterile alpha motif/pointed domainSUPERFAMILY47769SAM/Pointed domaincoord: 23..67

Blast
[Close]
BLAST of TCONS_00062510-protein vs. Swiss-Prot (Human)
Match: CS047 (Uncharacterized protein C19orf47 OS=Homo sapiens GN=C19orf47 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 8.148e-18
Identity = 33/64 (51.56%), Postives = 48/64 (75.00%), Query Frame = 0 
Query:    8 WEKFFKEAGIPGKLVSDYANVFCDNRMRLDMLEELNKEVLQELGIKAVGDIIAILRYSKIKQKE 71
            W +FFKEAGIP     +YA +F DNR++  ML +LNKE++ ELG+  VGDIIAIL+++K+  ++
Sbjct:   48 WIQFFKEAGIPPGPAVNYAVMFVDNRIQKSMLLDLNKEIMNELGVTVVGDIIAILKHAKVVHRQ 111
The following BLAST results are available for this feature:
BLAST of TCONS_00062510-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CS0478.148e-1851.56Uncharacterized protein C19orf47 OS=Homo sapiens G... [more]
back to top