TCONS_00062553-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062553-protein
Unique NameTCONS_00062553-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length160

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062553-protein ID=TCONS_00062553-protein|Name=TCONS_00062553-protein|organism=Clytia hemisphaerica|type=polypeptide|length=160bp
AITQIIRTVSRDSTGSSGSRNSMNFSGRFQNLVTLMAHPFALKYAGSEDD
NHSLSTIGREYKDDDRVPLHTYLDLGLDGLIRETNFTREEIQRMYRGFKQ
ECPRGLLDEETFLAILNMLFPGGDPTLYCSRIFNTFDRRKTGKLTFEVSH
RHYVYTVGAL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039189XLOC_039189Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062553TCONS_00062553Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.110coord: 72..150
e-value: 6.9E-16
score: 58.3
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 77..147

Blast
[Close]
BLAST of TCONS_00062553-protein vs. Swiss-Prot (Human)
Match: KCIP1 (Kv channel-interacting protein 1 OS=Homo sapiens GN=KCNIP1 PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 3.066e-19
Identity = 35/72 (48.61%), Postives = 48/72 (66.67%), Query Frame = 0 
Query:   76 GLDGLIRETNFTREEIQRMYRGFKQECPRGLLDEETFLAILNMLFPGGDPTLYCSRIFNTFDRRKTGKLTFE 147
            GL+ L  +TNFT+ E+Q +YRGFK ECP G+++E+TF  I    FP GD + Y   +FN FD  +TG + FE
Sbjct:   49 GLEQLEAQTNFTKRELQVLYRGFKNECPSGVVNEDTFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFE 120
The following BLAST results are available for this feature:
BLAST of TCONS_00062553-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KCIP13.066e-1948.61Kv channel-interacting protein 1 OS=Homo sapiens G... [more]
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