TCONS_00062605-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062605-protein
Unique NameTCONS_00062605-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length250

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062605-protein ID=TCONS_00062605-protein|Name=TCONS_00062605-protein|organism=Clytia hemisphaerica|type=polypeptide|length=250bp
LKGTSHNKADQKPSKSVRQEVADLLNSRFRKQIGNRSSVPYKMISEGEIK
VDGLPNDFELRNPSKCANWELDIIKQHMENISFLVVKTREKPLEEKNTES
ESDQNIELEGQNVEAIDQMKNTEPIEDQNIELEGQNVEAIDQVSTEPEEV
THKKNHRKRKAAFDDRLEDICRMLDDDDLVPNASDQEVTLKEVKEKDERN
EGYVEYIKTHGKVKGGERYFVKWIGFKKLTWEKAEHIPEHILSYYKCSLK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039233XLOC_039233Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062605TCONS_00062605Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004212GTF2I
IPR016197Chromodomain-like
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.40coord: 189..249
e-value: 1.6E-6
score: 27.3
IPR004212GTF2I-like repeatGENE3D3.90.1460.10coord: 14..93
e-value: 2.1E-10
score: 40.0
IPR004212GTF2I-like repeatPFAMPF02946GTF2Icoord: 18..85
e-value: 9.0E-9
score: 35.2
IPR004212GTF2I-like repeatPROSITEPS51139GTF2Icoord: 8..98
score: 9.147
IPR004212GTF2I-like repeatSUPERFAMILY117773GTF2I-like repeatcoord: 16..92
IPR016197Chromo domain-likeSUPERFAMILY54160Chromo domain-likecoord: 196..246

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062605-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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