TCONS_00062972-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062972-protein
Unique NameTCONS_00062972-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length613

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062972-protein ID=TCONS_00062972-protein|Name=TCONS_00062972-protein|organism=Clytia hemisphaerica|type=polypeptide|length=613bp
MYNGWISDREAIESECGIESVLNNFSSGVGRDVTVSIIKSLVHQKSASKE
LFNSEKDLEWTMDVICFGLTMPLTDMELETIKNCVYLYLDWSSVFSSKPK
PGIPCQIVRNKEHYFAQMLKHLTNMFIPRESSTTNYQNNFCSRILSDIKT
LVQEGNMGKSSSEDVLRFYLGISGRLLSQPPMKGGLADMLCEQLINSLIT
VWLHVSCYYFPSPTLWCTLQEEFQTWRHNHILILQWNKLTYVLTRKVLAI
IFGPSYPLPSLYKNDQTEDIKLPLNMSDDIIVQCWFRFLHCMGNPVDLTN
KIIIANTPNFAMYGLEHNQDPASHPSLKSLPQSFLKAMQGVSVLVKMFLG
ASIQDTRSTSILSQSFRGDRKSATLGPTESHIAAVFANKAATVPGVRRIA
DQSSAKTVRDDSNITPKTMNAIAAESNCILHLFGGWLFDVCLSGVELSKV
LASVGVISCGIKPQSYHLSSEDIEVGRSLPPVIKNAFEPGRAEAFGTLCQ
IFCHANVNGQAILPVYLSRFYLTLAVGLCYGETKAGQVLGEILLNITDIL
RIDLHGVQVLIPNILQAIELILPSSDISLGYDLSLVMLRRSCIHILLSML
CLPLHFLQLPIQG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039442XLOC_039442Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062972TCONS_00062972Clytia hemisphaericatranscript
Blast
BLAST of TCONS_00062972-protein vs. Swiss-Prot (Human)
Match: RLGPB (Ral GTPase-activating protein subunit beta OS=Homo sapiens GN=RALGAPB PE=1 SV=1)

HSP 1 Score: 324.324 bits (830), Expect = 6.045e-97
Identity = 212/627 (33.81%), Postives = 326/627 (51.99%), Query Frame = 0
Query:    1 MYNGWISDREAIESECGIESVLNNFSSGVGRDVTVSIIKSL-----VHQKSASKELFNSEKDLEWTMDVICFGLTMPLTDMELETIKNCVYLYLDWSSVFSSKPKPGIPCQIVRNKEHYFAQMLKHLTNMFIPRESSTTNYQNNFCSRILSDIKTLVQEGN-MGKSSSEDVLRFYLGISGRLLSQPPMKGGLADMLCEQLINSLITVWLHVSCYYFPSPTLWCTLQEEFQTWRHNHILILQWNKLTYVLTRKVLAIIFGPSYPLPSLYKNDQTEDIKLPLNMSDDIIVQCWFRFLHCMGNPVDLTNKIIIANTPNFAMYGLEHN---QDPASHPSLKSLPQSFLKAMQGVSVLVKMFLGASIQDTRS---TSILSQSFRGDRKSATLGPTESHIAAVFANKAA------TVPGVRRIADQSSAKTVRDDSNITPK----TMNAIAAESNCILHLFGGWLFDVCLSGVEL-------SKVLASVGVISCGIKPQSYHLSSEDIEVGRSL--PPVIKNAFEPGRAEAFGTLCQIFCHANVNGQAILPVYLSRFYLTLAVGLCYGETKAGQVLGEILLNITDILRIDLHGVQVLIPNILQAIELILPSSDIS-LGYDLSLVMLRRSCIHI 595
            MY+ W S    I+++ G  SVL+++   VGR+V  ++++ L         + S+ L  ++K+++WTM+VIC+GLT+PL   + ET+K CV +Y DW       PK  IP  +++    Y   +LKHL N+F+PR+   ++ Q   C ++L  I+ L +E + M + + E +L F L I+  LL+ P ++GG+A+ L E+LI  L  VWL      FP+P  W T +E    WRH+  ++ QW+K+   LT ++L   +GPS+P    +K    +   +P  M ++ + Q WFRFLH + NPVDL+N  II++TP F    L  +   Q+   +P LK LPQ F +AM+G+S LV  FLG S   + S   T +   S       +T  P      AV  NKA       +     ++  Q+S+ +     N T             + N IL+LFG WLFD      +L       S + A     S   + +   +S+ D  V   +       + +E GRAEA GTLC+IFC +   G+ ILP YLSRFY+ L  GL   +     VL  ++LN   +   DL G+ V++P  + A+E ILP  ++S     ++   LRRS I+I
Sbjct:    1 MYSEWRSLHLVIQNDQGHTSVLHSYPESVGREVANAVVRPLGQVLGTPSVAGSENLLKTDKEVKWTMEVICYGLTLPL---DGETVKYCVDVYTDWIMALV-LPKDSIPLPVIKEPNQYVQTILKHLQNLFVPRQEQGSS-QIRLCLQVLRAIQKLARESSLMARETWEVLLLFLLQINDILLAPPTVQGGIAENLAEKLIGVLFEVWLLACTRCFPTPPYWKTAKEMVANWRHHPAVVEQWSKVICALTSRLLRFTYGPSFP---AFKVPDEDASLIPPEMDNECVAQTWFRFLHMLSNPVDLSNPAIISSTPKFQEQFLNVSGMPQELNQYPCLKHLPQIFFRAMRGISCLVDAFLGISRPRSDSAPPTPVNRLSMPQSAAVSTTPPHNRRHRAVTVNKATMKTSTVSTAHASKVQHQTSSTSPLSSPNQTSSEPRPLPAPRRPKVNSILNLFGSWLFDAAFVHCKLHNGINRDSSMTAITTQASMEFRRKGSQMST-DTMVSNPMFDASEFPDNYEAGRAEACGTLCRIFC-SKKTGEEILPAYLSRFYMLLIQGLQINDYVCHPVLASVILNSPPLFCCDLKGIDVVVPYFISALETILPDRELSKFKSYVNPTELRRSSINI 617          
The following BLAST results are available for this feature:
BLAST of TCONS_00062972-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RLGPB6.045e-9733.81Ral GTPase-activating protein subunit beta OS=Homo... [more]
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